RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PNMA8CA0A1B0GUJ8 204 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 HSPB6O14558 160 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 OR2H2O95918 312 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 IGHV1-8P0DP01 117 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 GLIPR1P48060 266 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 AESQ08117 197 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 SSX2Q16385 188 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 LRRC75BQ2VPJ9 315 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 PRAMEF5Q5TYX0 476 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 ZNF691Q5VV52 312 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 DHRSXQ8N5I4 330 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 C11orf44Q8N8P7 122 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 ZNF714Q96N38 554 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 GPER1Q99527 375 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 INPP5EQ9NRR6 644 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 MRPS18AQ9NVS2 196 aaKnown RBP10.15□□□□□ -0.78
SMAD3-208ENST00000558827 GLS2Q9UI32 602 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 HILPDAQ9Y5L2 63 aa10.15□□□□□ -0.78
SMAD3-208ENST00000558827 A0A1B0GUS0 222 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 hADV38S2A0JD32 116 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 TMEM212A6NML5 194 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 SH2D1BO14796 132 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 SULT1B1O43704 296 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 KDM4BO94953 1096 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 LALBAP00709 142 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 GNAO1P09471 354 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 CCDC159P0C7I6 412 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 GDNFP39905 211 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 PROK1P58294 105 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 ATXN7L3Q14CW9 347 aaPredicted RBP10.14□□□□□ -0.79
SMAD3-208ENST00000558827 ZNF146Q15072 292 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 KISS1Q15726 138 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 PRR31Q5SQ13 230 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 ASPHD2Q6ICH7 369 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 Q6P435 159 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 TREML4Q6UXN2 200 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 TMEM219Q86XT9 240 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 SERPINA12Q8IW75 414 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 Q8IYB0 196 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 OR5D14Q8NGL3 314 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 OR13D1Q8NGV5 346 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 OR5R1Q8NH85 324 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 GGHQ92820 318 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 FAM192AQ9GZU8 254 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 MEGF9Q9H1U4 602 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 ZNF696Q9H7X3 374 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 TCF7L1Q9HCS4 588 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 ING4Q9UNL4 249 aa10.14□□□□□ -0.79
SMAD3-208ENST00000558827 VWFP04275 2813 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 TRAV39A0A0B4J263 110 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 A0A0G2JK05 382 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 A0A1W2PPK0 400 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 MGST3O14880 152 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 DEGS1O15121 323 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 XPNPEP2O43895 674 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 CHST1O43916 411 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 CDRT1O95170 752 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 HTR3BO95264 441 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 MT-ND2P03891 347 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 RAB3AP20336 220 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 TGFBR2P37173 567 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 P2RX3P56373 397 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 ZP1P60852 638 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 ADARB1P78563 741 aaKnown RBP10.13□□□□□ -0.79
SMAD3-208ENST00000558827 MEF2CQ06413 473 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-208ENST00000558827 GABPB1Q06547 395 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-208ENST00000558827 HABP2Q14520 560 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-208ENST00000558827 CDK5R1Q15078 307 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 UTF1Q5T230 341 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 TTC23Q5W5X9 447 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 TMPRSS11AQ6ZMR5 421 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 NDNFQ8TB73 568 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 PIFOQ8TCI5 191 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 TNFAIP8L1Q8WVP5 186 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 CITED1Q99966 193 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 JAM3Q9BX67 310 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 ZNF581Q9P0T4 197 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 FOXJ3Q9UPW0 622 aa10.13□□□□□ -0.79
SMAD3-208ENST00000558827 GABRPO00591 440 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 IGHV3-7P01780 117 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 MYL12AP19105 171 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 CDK2P24941 298 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 CD24P25063 80 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 DCKP27707 260 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 GABRA5P31644 462 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 OR3A4PP47883 348 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 SLC34A1Q06495 639 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 LTC4SQ16873 150 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 KRBOX4Q5JUW0 171 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 SPIN3Q5JUX0 258 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 RPL22L1Q6P5R6 122 aaKnown RBP10.12□□□□□ -0.79
SMAD3-208ENST00000558827 CCBE1Q6UXH8 406 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-208ENST00000558827 PARP16Q8N5Y8 322 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 GPR148Q8TDV2 347 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 COQ2Q96H96 371 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 TMEM80Q96HE8 168 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 RDH12Q96NR8 316 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 OR5M11Q96RB7 305 aa10.12□□□□□ -0.79
SMAD3-208ENST00000558827 MYCBPQ99417 103 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-208ENST00000558827 PPIL3Q9H2H8 161 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms