RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 RPS27AP62979 156 aaKnown RBP8.78□□□□□ -1
TPM1-212ENST00000558347 UBA52P62987 128 aaKnown RBP8.78□□□□□ -1
TPM1-212ENST00000558347 PSG4Q00888 419 aa8.78□□□□□ -1
TPM1-212ENST00000558347 TAF13Q15543 124 aa8.78□□□□□ -1
TPM1-212ENST00000558347 EFNB3Q15768 340 aa8.78□□□□□ -1
TPM1-212ENST00000558347 C2orf68Q2NKX9 166 aa8.78□□□□□ -1
TPM1-212ENST00000558347 KRTAP27-1Q3LI81 207 aa8.78□□□□□ -1
TPM1-212ENST00000558347 ZNF260Q3ZCT1 412 aa8.78□□□□□ -1
TPM1-212ENST00000558347 C11orf88Q6PI97 169 aa8.78□□□□□ -1
TPM1-212ENST00000558347 OR2W3Q7Z3T1 314 aa8.78□□□□□ -1
TPM1-212ENST00000558347 PRIMA1Q86XR5 153 aa8.78□□□□□ -1
TPM1-212ENST00000558347 BPIFB2Q8N4F0 458 aa8.78□□□□□ -1
TPM1-212ENST00000558347 JAGN1Q8N5M9 183 aa8.78□□□□□ -1
TPM1-212ENST00000558347 EIF4E3Q8N5X7 224 aaKnown RBP8.78□□□□□ -1
TPM1-212ENST00000558347 OR1M1Q8NGA1 313 aa8.78□□□□□ -1
TPM1-212ENST00000558347 OR5M8Q8NGP6 311 aa8.78□□□□□ -1
TPM1-212ENST00000558347 C10orf105Q8TEF2 133 aa8.78□□□□□ -1
TPM1-212ENST00000558347 PPP1R14AQ96A00 147 aa8.78□□□□□ -1
TPM1-212ENST00000558347 VRK1Q99986 396 aaPredicted RBP8.78□□□□□ -1
TPM1-212ENST00000558347 OR2H1Q9GZK4 316 aa8.78□□□□□ -1
TPM1-212ENST00000558347 ARL6Q9H0F7 186 aa8.78□□□□□ -1
TPM1-212ENST00000558347 WNT5BQ9H1J7 359 aa8.78□□□□□ -1
TPM1-212ENST00000558347 KCNK15Q9H427 330 aa8.78□□□□□ -1
TPM1-212ENST00000558347 PLK3Q9H4B4 646 aa8.78□□□□□ -1
TPM1-212ENST00000558347 NARFLQ9H6Q4 476 aa8.78□□□□□ -1
TPM1-212ENST00000558347 ZNF442Q9H7R0 627 aa8.78□□□□□ -1
TPM1-212ENST00000558347 SDHAF2Q9NX18 166 aa8.78□□□□□ -1
TPM1-212ENST00000558347 PLEK2Q9NYT0 353 aa8.78□□□□□ -1
TPM1-212ENST00000558347 CGGBP1Q9UFW8 167 aaPredicted RBP8.78□□□□□ -1
TPM1-212ENST00000558347 PFDN2Q9UHV9 154 aa8.78□□□□□ -1
TPM1-212ENST00000558347 YLPM1P49750 1951 aaKnown RBP8.77□□□□□ -1.01
TPM1-212ENST00000558347 FXYD6-FXYD2A0A087WZ82 144 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 KRBOX1C9JBD0 128 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 H3BSH0 61 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 P2RY10O00398 339 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 ARPC5O15511 151 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 CD5LO43866 347 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 NMBP08949 121 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 MGMTP16455 207 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 QRFPP83859 136 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 ZNF345Q14585 488 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 MSMPQ1L6U9 139 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 RSPO1Q2MKA7 263 aaPredicted RBP8.77□□□□□ -1.01
TPM1-212ENST00000558347 ATPAF1Q5TC12 328 aaPredicted RBP8.77□□□□□ -1.01
TPM1-212ENST00000558347 DCAF12L2Q5VW00 463 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 OVCH2Q7RTZ1 564 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 HSD17B13Q7Z5P4 300 aaPredicted RBP8.77□□□□□ -1.01
TPM1-212ENST00000558347 SLC25A42Q86VD7 318 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 OR51A2Q8NGJ7 313 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 OR5D14Q8NGL3 314 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 OR8S1Q8NH09 359 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 OR1F12Q8NHA8 337 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 FAM168AQ92567 244 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 PBOV1Q9GZY1 135 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 FXYD6Q9H0Q3 95 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 ABCA1O95477 2261 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 SONP18583 2426 aaKnown RBP8.77□□□□□ -1.01
TPM1-212ENST00000558347 ABCA2Q9BZC7 2435 aa8.77□□□□□ -1.01
TPM1-212ENST00000558347 MEIS3P1A6NDR6 274 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 A8MXK9 166 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 RAB27BO00194 218 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 BET1O15155 118 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 SYT7O43581 403 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 OR2F2O95006 317 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 SIX6O95475 246 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 TTRP02766 147 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 CHRM2P08172 466 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 ZNF250P15622 560 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 SLC25A16P16260 332 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 RAB3AP20336 220 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 CD34P28906 385 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 PPOXP50336 477 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 UBE2MP61081 183 aaKnown RBP8.76□□□□□ -1.01
TPM1-212ENST00000558347 LOXL1Q08397 574 aaPredicted RBP8.76□□□□□ -1.01
TPM1-212ENST00000558347 OR2F1Q13607 317 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 ACTBL2Q562R1 376 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 RNASE10Q5GAN6 216 aaKnown RBP8.76□□□□□ -1.01
TPM1-212ENST00000558347 PABPC1L2AQ5JQF8 200 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 LY6G6FQ5SQ64 297 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 LIN54Q6MZP7 749 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 ZNF774Q6NX45 483 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 DRAM2Q6UX65 266 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 PGAP1Q75T13 922 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 LYG2Q86SG7 212 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 PDZD9Q8IXQ8 264 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 ZCCHC24Q8N2G6 241 aaKnown RBP8.76□□□□□ -1.01
TPM1-212ENST00000558347 ZNF283Q8N7M2 679 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 OR4D6Q8NGJ1 314 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 OR13C8Q8NGS7 320 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 DVL3Q92997 716 aaPredicted RBP8.76□□□□□ -1.01
TPM1-212ENST00000558347 SPTSSAQ969W0 71 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 FGGYQ96C11 551 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 TINAGL1Q9GZM7 467 aaPredicted RBP8.76□□□□□ -1.01
TPM1-212ENST00000558347 CHST6Q9GZX3 395 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 MFFQ9GZY8 342 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 SLC25A32Q9H2D1 315 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 PPA2Q9H2U2 334 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 CNTD2Q9H8S5 307 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 GLS2Q9UI32 602 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 ANAPC10Q9UM13 185 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms