RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 H0YL77 283 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 H3BSH0 61 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 J3QT63 122 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 NDUFS8O00217 210 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 SLC22A1O15245 554 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 TPD52L2O43399 206 aaKnown RBP4.81□□□□□ -1.64
SCAF11-213ENST00000550629 NOL3O60936 208 aaKnown RBP4.81□□□□□ -1.64
SCAF11-213ENST00000550629 CYB5AP00167 134 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 HCKP08631 526 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 UBBP0CG47 229 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 DAOP14920 347 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 CPT2P23786 658 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 GIFP27352 417 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 ZNF93P35789 620 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-213ENST00000550629 PTGFRP43088 359 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 MAGEB1P43366 347 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 BMXP51813 675 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 TMEM33P57088 247 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 CCL8P80075 99 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 ZNF154Q13106 437 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 PDZK1IP1Q13113 114 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 FHL3Q13643 280 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 INSL4Q14641 139 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 CTF1Q16619 201 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 HFEQ30201 348 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 DEFB113Q30KQ7 82 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 C1orf100Q5SVJ3 147 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 FAM27D1Q5T7N8 215 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 GPR107Q5VW38 600 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 GLT8D1Q68CQ7 371 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 HIST2H2BCQ6DN03 193 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 PRSS57Q6UWY2 283 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 ASCL4Q6XD76 172 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 SLC16A12Q6ZSM3 486 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 WDR86Q86TI4 376 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 LYPD6Q86Y78 171 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 MKXQ8IYA7 352 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 Q8IYB0 196 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 C1orf87Q8N0U7 546 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 PXT1Q8NFP0 134 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 ZNF671Q8TAW3 534 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 ITLN1Q8WWA0 313 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 AQP3Q92482 292 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 GTF3AQ92664 365 aaKnown RBP4.81□□□□□ -1.64
SCAF11-213ENST00000550629 TMIGD2Q96BF3 282 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 NRIP2Q9BQI9 281 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 FGF23Q9GZV9 251 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-213ENST00000550629 OR51E2Q9H255 320 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 PPIL3Q9H2H8 161 aaKnown RBP4.81□□□□□ -1.64
SCAF11-213ENST00000550629 CHODLQ9H9P2 273 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 EXOSC4Q9NPD3 245 aaKnown RBP4.81□□□□□ -1.64
SCAF11-213ENST00000550629 BATF3Q9NR55 127 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 PCDHB16Q9NRJ7 776 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 RASL12Q9NYN1 266 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 GHRLQ9UBU3 117 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 SETXQ7Z333 2677 aaKnown RBP4.81□□□□□ -1.64
SCAF11-213ENST00000550629 ABCA4P78363 2273 aa4.81□□□□□ -1.64
SCAF11-213ENST00000550629 ANKRD17O75179 2603 aaKnown RBP4.8□□□□□ -1.64
SCAF11-213ENST00000550629 PDZD2O15018 2839 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 IGKV1-27A0A075B6S5 117 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 A0A1W2PPK0 400 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 IFITM5A6NNB3 132 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 SLC17A2O00624 439 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 ZNF780AO75290 641 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-213ENST00000550629 RP2O75695 350 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 LHBP01229 141 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 IL1AP01583 271 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 IGHV4-39P01824 125 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 IGKV2-30P06310 120 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 IRF2P14316 349 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 ADRA2CP18825 462 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 RAB3BP20337 219 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 CDKN1AP38936 164 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 HAAOP46952 286 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 ATP5J2P56134 94 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 ERVK11-1P61568 191 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 DYNC1I2Q13409 638 aaKnown RBP4.8□□□□□ -1.64
SCAF11-213ENST00000550629 GPR176Q14439 515 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 KCNJ8Q15842 424 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 DDI2Q5TDH0 399 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 ELP2Q6IA86 826 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 HAGHLQ6PII5 290 aaPredicted RBP4.8□□□□□ -1.64
SCAF11-213ENST00000550629 WDR82Q6UXN9 313 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 DNM1P46Q6ZS02 220 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 USP43Q70EL4 1123 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 SATL1Q86VE3 508 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 MOGAT3Q86VF5 341 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 C11orf53Q8IXP5 236 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 ZCCHC24Q8N2G6 241 aaKnown RBP4.8□□□□□ -1.64
SCAF11-213ENST00000550629 JAGN1Q8N5M9 183 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 POC1AQ8NBT0 407 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 SCCPDHQ8NBX0 429 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 Q8NFD4 153 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 OR52N4Q8NGI2 321 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 OR51A2Q8NGJ7 313 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 OR6M1Q8NGM8 313 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 OR51F2Q8NH61 342 aa4.8□□□□□ -1.64
SCAF11-213ENST00000550629 RPL3LQ92901 407 aaKnown RBP4.8□□□□□ -1.64
SCAF11-213ENST00000550629 C12orf43Q96C57 262 aaKnown RBP4.8□□□□□ -1.64
SCAF11-213ENST00000550629 MRPS24Q96EL2 167 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms