RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 TNFRSF14Q92956 283 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 SNX22Q96L94 193 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 OR5M11Q96RB7 305 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 CDCA4Q9BXL8 241 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 ZMAT3Q9HA38 289 aaKnown RBP9.69□□□□□ -0.86
RAB5C-204ENST00000547517 TMEM138Q9NPI0 162 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 TPRKBQ9Y3C4 175 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 TRAV8-7A0A075B6U6 113 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 SH2D1BO14796 132 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 NPFFO15130 113 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 IGFBP3P17936 291 aaPredicted RBP9.68□□□□□ -0.86
RAB5C-204ENST00000547517 FSTP19883 344 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 COX7A1P24310 79 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 EEF1B2P24534 225 aaKnown RBP9.68□□□□□ -0.86
RAB5C-204ENST00000547517 BDKRB2P30411 391 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 ZNF93P35789 620 aaPredicted RBP9.68□□□□□ -0.86
RAB5C-204ENST00000547517 VHLP40337 213 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 OR3A1P47881 315 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 BDH1Q02338 343 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 SCN1BQ07699 218 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 SPHARQ15513 63 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 MED22Q15528 200 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 RNLSQ5VYX0 342 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 ZNF782Q6ZMW2 699 aaPredicted RBP9.68□□□□□ -0.86
RAB5C-204ENST00000547517 C1orf122Q6ZSJ8 110 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 TCF23Q7RTU1 214 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 PXT1Q8NFP0 134 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 OR4S1Q8NGB4 309 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 OR5D13Q8NGL4 314 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 TBC1D15Q8TC07 691 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 SLC25A28Q96A46 364 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 DERL3Q96Q80 235 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 CCDC90BQ9GZT6 254 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 PPA2Q9H2U2 334 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 RHOFQ9HBH0 211 aa9.68□□□□□ -0.86
RAB5C-204ENST00000547517 LSM2Q9Y333 95 aaKnown RBP9.68□□□□□ -0.86
RAB5C-204ENST00000547517 ANK2Q01484 3957 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 TRBV5-7A0A0A0MS05 114 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 MEIOCA2RUB1 952 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 CLDN34H7C241 214 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 HSPB6O14558 160 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 MGST3O14880 152 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 RGS10O43665 173 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 CDRT1O95170 752 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 ALDOBP05062 364 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 RNASE1P07998 156 aaKnown RBP9.67□□□□□ -0.86
RAB5C-204ENST00000547517 MELTFP08582 738 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 CRHBPP24387 322 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 SAA4P35542 130 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 MTNR1BP49286 362 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 BMXP51813 675 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 ERVFRD-1P60508 538 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 IRF3Q14653 427 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 RSU1Q15404 277 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 HCP5Q6MZN7 132 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 Q6YL49 198 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 TRAPPC6BQ86SZ2 158 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 PPP1R35Q8TAP8 253 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 GCDHQ92947 438 aaPredicted RBP9.67□□□□□ -0.86
RAB5C-204ENST00000547517 NR1H4Q96RI1 486 aaPredicted RBP9.67□□□□□ -0.86
RAB5C-204ENST00000547517 ZNF184Q99676 751 aaPredicted RBP9.67□□□□□ -0.86
RAB5C-204ENST00000547517 TMED9Q9BVK6 235 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 PRDM13Q9H4Q3 707 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 UNKLQ9H9P5 680 aaKnown RBP9.67□□□□□ -0.86
RAB5C-204ENST00000547517 SEBOXQ9HB31 216 aaPredicted RBP9.67□□□□□ -0.86
RAB5C-204ENST00000547517 NOX4Q9NPH5 578 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 RAB26Q9ULW5 256 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 FAM96BQ9Y3D0 163 aa9.67□□□□□ -0.86
RAB5C-204ENST00000547517 hCG_1809904A0A1W2PP81 198 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 A0A1W2PPE2 198 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 A0A1W2PR64 198 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 A0A1W2PRV1 198 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 hADV38S2A0JD32 116 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 SLC33A1O00400 549 aaPredicted RBP9.66□□□□□ -0.86
RAB5C-204ENST00000547517 DEGS1O15121 323 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 HTR3BO95264 441 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 PAHP00439 452 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 MAS1P04201 325 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 CD1AP06126 327 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 FBP1P09467 338 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 ZNF728P0DKX0 622 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 SERPINA2P20848 420 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 MAPK3P27361 379 aaPredicted RBP9.66□□□□□ -0.86
RAB5C-204ENST00000547517 TGFBR2P37173 567 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 PTGFRP43088 359 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 UBE2E1P51965 193 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 DLX6P56179 175 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 P2RX3P56373 397 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 ACSM1Q08AH1 577 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 INSL4Q14641 139 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 ATXN7L3Q14CW9 347 aaPredicted RBP9.66□□□□□ -0.86
RAB5C-204ENST00000547517 PIGYQ3MUY2 71 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 Q6P435 159 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 C12orf54Q6X4T0 127 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 JAGN1Q8N5M9 183 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 C11orf42Q8N5U0 333 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 UFD1Q92890 307 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 ZNF714Q96N38 554 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 METTL9Q9H1A3 318 aa9.66□□□□□ -0.86
RAB5C-204ENST00000547517 DUSP21Q9H596 190 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms