RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PRSS50Q9UI38 385 aa17.1■□□□□ 0.33
SUDS3-204ENST00000543473 MBPP02686 304 aaPredicted RBP17.1■□□□□ 0.33
SUDS3-204ENST00000543473 ARR3P36575 388 aa17.1■□□□□ 0.33
SUDS3-204ENST00000543473 TDRD15B5MCY1 1934 aaKnown RBP17.1■□□□□ 0.33
SUDS3-204ENST00000543473 ZNF205O95201 554 aa17.1■□□□□ 0.33
SUDS3-204ENST00000543473 CCKARP32238 428 aa17.1■□□□□ 0.33
SUDS3-204ENST00000543473 LHX9Q9NQ69 397 aa17.1■□□□□ 0.33
SUDS3-204ENST00000543473 SLC2A9Q9NRM0 540 aa17.1■□□□□ 0.33
SUDS3-204ENST00000543473 NAT8BQ9UHF3 227 aa17.1■□□□□ 0.33
SUDS3-204ENST00000543473 RBBP6Q7Z6E9 1792 aaKnown RBP17.1■□□□□ 0.33
SUDS3-204ENST00000543473 FAM166BA8MTA8 275 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 CHEK1O14757 476 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 ENSAO43768 121 aaKnown RBP17.09■□□□□ 0.33
SUDS3-204ENST00000543473 CHST1O43916 411 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 FAM3AP98173 230 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 SKP2Q13309 424 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 FAM162BQ5T6X4 162 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 ADAT3Q96EY9 351 aaPredicted RBP17.09■□□□□ 0.33
SUDS3-204ENST00000543473 A8MXK9 166 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 CCL7P80098 99 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 C16orf47Q6ZP98 133 aaPredicted RBP17.09■□□□□ 0.33
SUDS3-204ENST00000543473 MUCL1Q96DR8 90 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 VDAC1P21796 283 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 UNQ9370/PRO34162Q6UXP9 181 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 TMEM52Q8NDY8 209 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 RNF133Q8WVZ7 376 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 ATP5SQ99766 215 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 ZNF391Q9UJN7 358 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 OR11L1Q8NGX0 322 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 NEIL1Q96FI4 390 aaPredicted RBP17.09■□□□□ 0.33
SUDS3-204ENST00000543473 SLC26A1Q9H2B4 701 aa17.09■□□□□ 0.33
SUDS3-204ENST00000543473 IGHV5-51A0A0C4DH38 117 aa17.08■□□□□ 0.33
SUDS3-204ENST00000543473 GAPDHP04406 335 aaKnown RBP17.08■□□□□ 0.33
SUDS3-204ENST00000543473 HOXC4P09017 264 aaPredicted RBP17.08■□□□□ 0.33
SUDS3-204ENST00000543473 GALMQ96C23 342 aa17.08■□□□□ 0.33
SUDS3-204ENST00000543473 WDR90Q96KV7 1748 aa17.08■□□□□ 0.33
SUDS3-204ENST00000543473 TRAV34A0A0B4J273 112 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 ATP6V0CP27449 155 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 TAAR6Q96RI8 345 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 ZNF638Q14966 1978 aaKnown RBP17.08■□□□□ 0.32
SUDS3-204ENST00000543473 ZDBF2Q9HCK1 2354 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 FCN1O00602 326 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 CBR3O75828 277 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 ZNF25P17030 456 aaPredicted RBP17.08■□□□□ 0.32
SUDS3-204ENST00000543473 ZNF154Q13106 437 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 PABPC1L2AQ5JQF8 200 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 OR10G3Q8NGC4 313 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 OR10G4Q8NGN3 311 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 OR10G9Q8NGN4 311 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 OR10G7Q8NGN6 311 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 KCNE4Q8WWG9 221 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 SH3BGRL2Q9UJC5 107 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 KIAA1324LA8MWY0 1029 aaPredicted RBP17.08■□□□□ 0.32
SUDS3-204ENST00000543473 PNPP00491 289 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 MGAT2Q10469 447 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 ZNF774Q6NX45 483 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 TBC1D26Q86UD7 250 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 SMDT1Q9H4I9 107 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 RCC2Q9P258 522 aaKnown RBP17.08■□□□□ 0.32
SUDS3-204ENST00000543473 LOXL2Q9Y4K0 774 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 PLXNA1Q9UIW2 1896 aa17.08■□□□□ 0.32
SUDS3-204ENST00000543473 FAM186AA6NE01 2351 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 THOC3Q96J01 351 aaKnown RBP17.07■□□□□ 0.32
SUDS3-204ENST00000543473 CACNA1IQ9P0X4 2223 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 IGKV1-8A0A0C4DH67 115 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 OR2M5A3KFT3 312 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 GREM1O60565 184 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 UPK3AO75631 287 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 CDS2O95674 445 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 HEXAP06865 529 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 PRR27Q6MZM9 219 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 ZNF880Q6PDB4 577 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 HOGA1Q86XE5 327 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 VAX2Q9UIW0 290 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 GUSBP11Q6P575 273 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 DGAT2L6Q6ZPD8 337 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 APOBEC3DQ96AK3 386 aaPredicted RBP17.07■□□□□ 0.32
SUDS3-204ENST00000543473 CCL11P51671 97 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 PRSS12P56730 875 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 VAX1Q5SQQ9 334 aa17.07■□□□□ 0.32
SUDS3-204ENST00000543473 SOX15O60248 233 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 TOX4O94842 621 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 BGLAPP02818 100 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.06■□□□□ 0.32
SUDS3-204ENST00000543473 FKBP11Q9NYL4 201 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 DTX4Q9Y2E6 619 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 SPINK4O60575 86 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 ZNF32P17041 273 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 TCTEX1D1Q8N7M0 179 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 EDARADDQ8WWZ3 215 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 C1QL1O75973 258 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 TMEM9BQ9NQ34 198 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 GPR132Q9UNW8 380 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 FUT9Q9Y231 359 aa17.06■□□□□ 0.32
SUDS3-204ENST00000543473 SHISA7A6NL88 538 aa17.05■□□□□ 0.32
SUDS3-204ENST00000543473 SYNGR2O43760 224 aa17.05■□□□□ 0.32
SUDS3-204ENST00000543473 ACAA1P09110 424 aaPredicted RBP17.05■□□□□ 0.32
SUDS3-204ENST00000543473 OR5G3P0C626 314 aa17.05■□□□□ 0.32
SUDS3-204ENST00000543473 CDC34P49427 236 aaPredicted RBP17.05■□□□□ 0.32
SUDS3-204ENST00000543473 DSCR4P56555 118 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms