RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 UCN2Q96RP3 112 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 UCK1Q9HA47 277 aa12.08□□□□□ -0.48
SCNN1A-215ENST00000540037 PROB1E7EW31 1015 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 ZNHIT1O43257 154 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 MSR1P21757 451 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 CD38P28907 300 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 GNMTQ14749 295 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 ICAM4Q14773 271 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 KHDC3LQ587J8 217 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 ODF3L1Q8IXM7 274 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 LGI3Q8N145 548 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 PLPP5Q8NEB5 264 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 OR5C1Q8NGR4 320 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 PP6455Q8WZ26 134 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 ZNF501Q96CX3 271 aaPredicted RBP12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 TMEM50AO95807 157 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 ZNF133P52736 654 aaPredicted RBP12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 SUMO3P55854 103 aaPredicted RBP12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 KCNMB1Q16558 191 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 C17orf82Q86X59 251 aaPredicted RBP12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 ZNF784Q8NCA9 323 aaPredicted RBP12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 NABP1Q96AH0 204 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 MEGF10Q96KG7 1140 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 SUCNR1Q9BXA5 334 aa12.07□□□□□ -0.48
SCNN1A-215ENST00000540037 A0A0U1RQV5 110 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 PPA1Q15181 289 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 GJC3Q8NFK1 279 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 NAT6Q93015 286 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 S100PBPQ96BU1 408 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 METTL9Q9H1A3 318 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 FABP4P15090 132 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 PLA2G5P39877 138 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 DMRTC2Q8IXT2 367 aaPredicted RBP12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 LRTM2Q8N967 370 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 LFNGQ8NES3 379 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 OR2M3Q8NG83 312 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 ABHD5Q8WTS1 349 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 P4HTMQ9NXG6 502 aa12.06□□□□□ -0.48
SCNN1A-215ENST00000540037 AQP7P3A6NL99 342 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 ETV2O00321 342 aaPredicted RBP12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 CA11O75493 328 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 SCAF4O95104 1147 aaKnown RBP12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 EN2P19622 333 aaPredicted RBP12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 GUCA1AP43080 201 aaPredicted RBP12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 DYNLT3P51808 116 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 OR14L1PQ8NHC6 308 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 CHRNA10Q9GZZ6 450 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 SMOC1Q9H4F8 434 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 WSB1Q9Y6I7 421 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 A0A1W2PR77 199 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 G3V3Y1 287 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 CTSSP25774 331 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 FRZBQ92765 325 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 MTIF3Q9H2K0 278 aaKnown RBP12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 C11orf1Q9H5F2 150 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 C3orf85A0A1B0GTC6 90 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 CD63P08962 238 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 ZNF154Q13106 437 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 ARL6IP1Q15041 203 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 SHHQ15465 462 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 TMEM123Q8N131 208 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 HIST3H2BBQ8N257 126 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 TMEM252Q8N6L7 170 aa12.05□□□□□ -0.48
SCNN1A-215ENST00000540037 ZNF407Q9C0G0 2248 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 IGHV1OR15-9A0A0B4J2B8 117 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 A0A1B0GW64 132 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 LMO7DNF2Z398 122 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 TRGC1P0CF51 173 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 NKX2-1P43699 371 aaPredicted RBP12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 SLC25A53Q5H9E4 307 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 RTL6Q6ICC9 239 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 OR2T2Q6IF00 324 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 MOB3AQ96BX8 217 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 CDCA3Q99618 268 aaPredicted RBP12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 CALHM2Q9HA72 323 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 MYOTQ9UBF9 498 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 FOXD3Q9UJU5 478 aaPredicted RBP12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 ST3GAL6Q9Y274 331 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 H3BP45 60 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 ADAM20O43506 726 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 F10P00742 488 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 IGLV3-19P01714 112 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 SPIN3Q5JUX0 258 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 SSX3Q99909 188 aa12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 AKIRIN1Q9H9L7 192 aaPredicted RBP12.04□□□□□ -0.48
SCNN1A-215ENST00000540037 MPPED1O15442 326 aa12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 HIST1H1BP16401 226 aaKnown RBP12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 GNRHRP30968 328 aa12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 LSM6P62312 80 aaKnown RBP12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 TLE1Q04724 770 aa12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 KIAA1456Q9P272 454 aa12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 PPP1R2P9O14990 202 aa12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 CELA2AP08217 269 aa12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 DTYMKP23919 212 aa12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 OTX1P32242 354 aaPredicted RBP12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 RPL23AP62750 156 aaKnown RBP12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 ZNF266Q14584 549 aa12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 ZNF774Q6NX45 483 aa12.03□□□□□ -0.48
SCNN1A-215ENST00000540037 PLXDC1Q8IUK5 500 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms