RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 LGALS7P47929 136 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 XKP51811 444 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 OR10A3P58181 314 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 UBE2KP61086 200 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 SLAMF1Q13291 335 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 FAM53BQ14153 422 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 OR4D1Q15615 310 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 CEACAM21Q3KPI0 293 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 HBMQ6B0K9 141 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 GLYATQ6IB77 296 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 AHSA2Q719I0 299 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 MRPL52Q86TS9 123 aaKnown RBP2.17□□□□□ -2.06
PRKDC-205ENST00000535375 CYP4Z1Q86W10 505 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 OTUD6BQ8N6M0 293 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 CLHC1Q8NHS4 586 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 ANGPTL6Q8NI99 470 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 BLNKQ8WV28 456 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 ZMYND19Q96E35 227 aaPredicted RBP2.17□□□□□ -2.06
PRKDC-205ENST00000535375 DERL3Q96Q80 235 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 OR2A7Q96R45 310 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 HBEGFQ99075 208 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 SPACA1Q9HBV2 294 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 FAM60AQ9NP50 221 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 ABCB9Q9NP78 766 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 NLRC5Q86WI3 1866 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 TMEM131Q92545 1883 aa2.17□□□□□ -2.06
PRKDC-205ENST00000535375 MYBPHLA2RUH7 354 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 OR6C70A6NIJ9 312 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 ZNF878C9JN71 531 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 C9JQL5 133 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 MKRN2OSH3BPM6 223 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 CLDN34H7C241 214 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 SCN2BO60939 215 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 FSTL3O95633 263 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 OR5AC1P0C628 307 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 SEC11BP0C7V7 166 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 LGALS3P17931 250 aaKnown RBP2.16□□□□□ -2.06
PRKDC-205ENST00000535375 TSPOP30536 169 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 MAGEA6P43360 314 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 AQP5P55064 265 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 ZNF235Q14590 738 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 ELOCQ15369 112 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 TRAM1Q15629 374 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 SSX1Q16384 188 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 MRPL2Q5T653 305 aaKnown RBP2.16□□□□□ -2.06
PRKDC-205ENST00000535375 TBPL2Q6SJ96 375 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 TRMT10CQ7L0Y3 403 aaKnown RBP2.16□□□□□ -2.06
PRKDC-205ENST00000535375 ITPRIPQ8IWB1 547 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 SELENOHQ8IZQ5 122 aaKnown RBP2.16□□□□□ -2.06
PRKDC-205ENST00000535375 ZDHHC22Q8N966 263 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 ZFP62Q8NB50 900 aaPredicted RBP2.16□□□□□ -2.06
PRKDC-205ENST00000535375 OR5H2Q8NGV7 314 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 YIPF6Q96EC8 236 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 CYTH2Q99418 400 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 TM2D3Q9BRN9 247 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 MFSD1Q9H3U5 465 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 IFT46Q9NQC8 304 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 DIABLOQ9NR28 239 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 SDHAF3Q9NRP4 125 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 TMEM38BQ9NVV0 291 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 MS4A12Q9NXJ0 267 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 NOS1P29475 1434 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 NRCAMQ92823 1304 aa2.16□□□□□ -2.06
PRKDC-205ENST00000535375 AK9Q5TCS8 1911 aa2.15□□□□□ -2.06
PRKDC-205ENST00000535375 IZUMO1RA6ND01 250 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 K7EPK0 472 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 POLR3GO15318 223 aaPredicted RBP2.15□□□□□ -2.07
PRKDC-205ENST00000535375 CRXO43186 299 aaPredicted RBP2.15□□□□□ -2.07
PRKDC-205ENST00000535375 MYO1DO94832 1006 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 IGKV5-2P06315 115 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 M6PRP20645 277 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 RPA3P35244 121 aaPredicted RBP2.15□□□□□ -2.07
PRKDC-205ENST00000535375 TUFMP49411 452 aaKnown RBP2.15□□□□□ -2.07
PRKDC-205ENST00000535375 C1QTNF8P60827 252 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 TMEM136Q6ZRR5 245 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 OR8A1Q8NGG7 326 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 NELFBQ8WX92 580 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 C22orf15Q8WYQ4 148 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 GTF2H4Q92759 462 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 FMC1Q96HJ9 113 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 CATSPER2Q96P56 530 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 PEBP4Q96S96 227 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 THTPAQ9BU02 230 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 SUCNR1Q9BXA5 334 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 POMKQ9H5K3 350 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 HMGXB4Q9UGU5 601 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 TAC3Q9UHF0 121 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 SHANK1Q9Y566 2161 aa2.15□□□□□ -2.07
PRKDC-205ENST00000535375 KIAA1671Q9BY89 1806 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 KIAA0232Q92628 1395 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 GMNCA6NCL1 334 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 PGPA6NDG6 321 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 CD300LBA8K4G0 201 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 MFNGO00587 321 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 UBDO15205 165 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 NDUFS6O75380 124 aaKnown RBP2.14□□□□□ -2.07
PRKDC-205ENST00000535375 CA2P00918 260 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 ZNF35P13682 527 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 IMPA1P29218 277 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 SLC6A1P30531 599 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms