RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	ZNF503-AS2	A6NEH8	195 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	OR5H14	A6NHG9	310 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	TUBAL3	A6NHL2	446 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	MKRN2OS	H3BPM6	223 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006		J3QT63	122 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	DIRAS3	O95661	229 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	KNG1	P01042	644 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	PRKACA	P17612	351 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	WT1	P19544	449 aa	Predicted RBP	9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	IGHV1-2	P23083	117 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	IL32	P24001	234 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	S100G	P29377	79 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	OPRM1	P35372	400 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	SERPINF1	P36955	418 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	PMEL	P40967	661 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	AP2S1	P53680	142 aa	Predicted RBP	9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	UCN	P55089	124 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	FXYD4	P59646	89 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	EXOSC2	Q13868	293 aa	Known RBP	9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	LY6D	Q14210	128 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	GABRA6	Q16445	453 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	ACSF3	Q4G176	576 aa	Predicted RBP	9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	SPATA46	Q5T0L3	261 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	HAGHL	Q6PII5	290 aa	Predicted RBP	9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	CRIP3	Q6Q6R5	217 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	FAM180A	Q6UWF9	173 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	ZNF546	Q86UE3	836 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	TMEM200A	Q86VY9	491 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006		Q8IYB0	196 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	OR5T2	Q8NGG2	359 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	TOMM40L	Q969M1	308 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	HDHD3	Q9BSH5	251 aa	Predicted RBP	9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	PKIB	Q9C010	78 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	TMEM165	Q9HC07	324 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	RAB18	Q9NP72	206 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	ZC4H2	Q9NQZ6	224 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	C1orf123	Q9NWV4	160 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	SHPK	Q9UHJ6	478 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	GPR132	Q9UNW8	380 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	OSGIN2	Q9Y236	505 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	SESN1	Q9Y6P5	492 aa		9.26	□□□□□ -0.93
SPIDR-222	ENST00000524006	LRRK2	Q5S007	2527 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	IGKV1-12	A0A0C4DH73	117 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	KIR2DS1	A0A191URI9	304 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	EFS	O43281	561 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	SMPD2	O60906	423 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	NGF	P01138	241 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	IGKV1D-12	P01611	117 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	CD8A	P01732	235 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	CTSD	P07339	412 aa	Predicted RBP	9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	SFTPB	P07988	381 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	CXCL2	P19875	107 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	PI3	P19957	117 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	CALCR	P30988	508 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	PTGER4	P35408	488 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	WNT5A	P41221	380 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	KIR2DS4	P43632	304 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	MZT1	Q08AG7	82 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	RBM39	Q14498	530 aa	Known RBP	9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	KIR2DS1	Q14954	304 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	ATXN7L3	Q14CW9	347 aa	Predicted RBP	9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	OR8G1	Q15617	311 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	C2orf68	Q2NKX9	166 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	C6orf183	Q5T699	404 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	NSUN5P2	Q63ZY6	315 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	ELP2	Q6IA86	826 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	TMEM211	Q6ICI0	200 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	OR2T2	Q6IF00	324 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	C11orf87	Q6NUJ2	197 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	OVCH2	Q7RTZ1	564 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	LHFPL1	Q86WI0	220 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	CALHM1	Q8IU99	346 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	BATF2	Q8N1L9	274 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	C17orf78	Q8N4C9	275 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	ZNF565	Q8N9K5	539 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	C9orf106	Q8NAJ2	232 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	OR1J1	Q8NGS3	322 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	HPSE2	Q8WWQ2	592 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	OR5P3	Q8WZ94	311 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	DYRK2	Q92630	601 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	WDR89	Q96FK6	387 aa	Predicted RBP	9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	CCDC120	Q96HB5	630 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	CITED4	Q96RK1	184 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	DHRS9	Q9BPW9	319 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	OBP2B	Q9NPH6	170 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	RDH8	Q9NYR8	311 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	KCNIP3	Q9Y2W7	256 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	AMDHD2	Q9Y303	409 aa		9.25	□□□□□ -0.93
SPIDR-222	ENST00000524006	CHD3	Q12873	2000 aa	Known RBP	9.24	□□□□□ -0.93
SPIDR-222	ENST00000524006		A0A1W2PR80	420 aa		9.24	□□□□□ -0.93
SPIDR-222	ENST00000524006	FAM221A	A4D161	298 aa		9.24	□□□□□ -0.93
SPIDR-222	ENST00000524006	LRP5L	A4QPB2	252 aa		9.24	□□□□□ -0.93
SPIDR-222	ENST00000524006	CEACAM18	A8MTB9	384 aa		9.24	□□□□□ -0.93
SPIDR-222	ENST00000524006		G3V3Q6	166 aa		9.24	□□□□□ -0.93
SPIDR-222	ENST00000524006	WDR1	O75083	606 aa		9.24	□□□□□ -0.93
SPIDR-222	ENST00000524006	OR2F2	O95006	317 aa		9.24	□□□□□ -0.93
SPIDR-222	ENST00000524006	CBR1	P16152	277 aa		9.24	□□□□□ -0.93
SPIDR-222	ENST00000524006	HLA-G	P17693	338 aa		9.24	□□□□□ -0.93
SPIDR-222	ENST00000524006	CA6	P23280	308 aa		9.24	□□□□□ -0.93
SPIDR-222	ENST00000524006	GCH1	P30793	250 aa		9.24	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms