RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 OR3A1P47881 315 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 EDDM3AQ14507 147 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 KISS1Q15726 138 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 CCDC58Q4VC31 144 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 TTC23Q5W5X9 447 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 SLC35E4Q6ICL7 350 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 RPL22L1Q6P5R6 122 aaKnown RBP13.83□□□□□ -0.2
SQLE-205ENST00000521232 PACRGLQ8N7B6 248 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 TPRX1Q8N7U7 411 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 OR5D18Q8NGL1 313 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 PIFOQ8TCI5 191 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 PPA2Q9H2U2 334 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 GSTK1Q9Y2Q3 226 aa13.83□□□□□ -0.2
SQLE-205ENST00000521232 TBL2Q9Y4P3 447 aaKnown RBP13.83□□□□□ -0.2
SQLE-205ENST00000521232 IRGMA1A4Y4 181 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 ODF3BA8MYP8 253 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 OR2H2O95918 312 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 ETV1P50549 477 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 SNU13P55769 128 aaKnown RBP13.82□□□□□ -0.2
SQLE-205ENST00000521232 ZP1P60852 638 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 LRRC36Q1X8D7 754 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 ZNF626Q68DY1 528 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 ZNF529Q6P280 563 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 BRICD5Q6PL45 260 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 TREML4Q6UXN2 200 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 LHFPL4Q7Z7J7 247 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 CNIH3Q8TBE1 160 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 RPS4Y2Q8TD47 263 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 MALSU1Q96EH3 234 aa13.82□□□□□ -0.2
SQLE-205ENST00000521232 EXOSC4Q9NPD3 245 aaKnown RBP13.82□□□□□ -0.2
SQLE-205ENST00000521232 A0A0G2JK05 382 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 VGLL3A8MV65 326 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 SIRPB1O00241 398 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 ARG1P05089 322 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 HCKP08631 526 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 P2RX3P56373 397 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 ADARB1P78563 741 aaKnown RBP13.81□□□□□ -0.2
SQLE-205ENST00000521232 LY6EQ16553 131 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 XAF1Q6GPH4 301 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 Q6P435 159 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 TMPRSS11AQ6ZMR5 421 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 DYNAPQ8N1N2 210 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 TSEN15Q8WW01 171 aaKnown RBP13.81□□□□□ -0.2
SQLE-205ENST00000521232 CYGBQ8WWM9 190 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 RGP1Q92546 391 aaPredicted RBP13.81□□□□□ -0.2
SQLE-205ENST00000521232 FBLN5Q9UBX5 448 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 DIMT1Q9UNQ2 313 aaKnown RBP13.81□□□□□ -0.2
SQLE-205ENST00000521232 UBE2J1Q9Y385 318 aaPredicted RBP13.81□□□□□ -0.2
SQLE-205ENST00000521232 PCDHGB5Q9Y5G0 923 aa13.81□□□□□ -0.2
SQLE-205ENST00000521232 OGG1O15527 345 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 TMEM225BP0DP42 221 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 RAB3AP20336 220 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 KIR2DS4P43632 304 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 IL18R1Q13478 541 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 CDK5R1Q15078 307 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 LDLRAD2Q5SZI1 272 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 OR2G6Q5TZ20 316 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 ASPHD2Q6ICH7 369 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 LIAT1Q6ZQX7 453 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 DHRSXQ8N5I4 330 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 CHST4Q8NCG5 386 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 SETD9Q8NE22 299 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 PXT1Q8NFP0 134 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 GPR148Q8TDV2 347 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 CORO2AQ92828 525 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 RAB18Q9NP72 206 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 BABAM2Q9NXR7 383 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 SESN1Q9Y6P5 492 aa13.8□□□□□ -0.2
SQLE-205ENST00000521232 FUOMA2VDF0 154 aa13.79□□□□□ -0.2
SQLE-205ENST00000521232 MEGF11A6BM72 1044 aa13.79□□□□□ -0.2
SQLE-205ENST00000521232 TIMM23O14925 209 aa13.79□□□□□ -0.2
SQLE-205ENST00000521232 CSN2P05814 226 aa13.79□□□□□ -0.2
SQLE-205ENST00000521232 MTNR1BP49286 362 aa13.79□□□□□ -0.2
SQLE-205ENST00000521232 RCN1Q15293 331 aa13.79□□□□□ -0.2
SQLE-205ENST00000521232 ELP2Q6IA86 826 aa13.79□□□□□ -0.2
SQLE-205ENST00000521232 FOXRED1Q96CU9 486 aaPredicted RBP13.79□□□□□ -0.2
SQLE-205ENST00000521232 CPNE2Q96FN4 548 aaPredicted RBP13.79□□□□□ -0.2
SQLE-205ENST00000521232 TMEM80Q96HE8 168 aa13.79□□□□□ -0.2
SQLE-205ENST00000521232 CDCA4Q9BXL8 241 aa13.79□□□□□ -0.2
SQLE-205ENST00000521232 TMEM133Q9H2Q1 129 aa13.79□□□□□ -0.2
SQLE-205ENST00000521232 EXOSC1Q9Y3B2 195 aaKnown RBP13.79□□□□□ -0.2
SQLE-205ENST00000521232 SIRT4Q9Y6E7 314 aaPredicted RBP13.79□□□□□ -0.2
SQLE-205ENST00000521232 HSPE1-MOB4S4R3N1 261 aa13.79□□□□□ -0.2
SQLE-205ENST00000521232 IGHV2-26A0A0B4J1V2 119 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 SLC33A1O00400 549 aaPredicted RBP13.78□□□□□ -0.2
SQLE-205ENST00000521232 DEGS1O15121 323 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 MAGEB3O15480 346 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 ALDOBP05062 364 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 CD2P06729 351 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 ZNF44P15621 663 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 MYL12AP19105 171 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 SOX2P48431 317 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 SCN1BQ07699 218 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 AESQ08117 197 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 DYNC1I2Q13409 638 aaKnown RBP13.78□□□□□ -0.2
SQLE-205ENST00000521232 SSX2Q16385 188 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 MINOS1Q5TGZ0 78 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 ASCL4Q6XD76 172 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 Q8NFD4 153 aa13.78□□□□□ -0.2
SQLE-205ENST00000521232 OR51A2Q8NGJ7 313 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms