RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 OR2A5Q96R48 311 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF275Q9NSD4 429 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 CALYQ9NYX4 217 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 MTCH1Q9NZJ7 389 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 DKKL1Q9UK85 242 aa3.43□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF816-ZNF321PA0A0X1KG74 233 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 TMEM120BA0PK00 339 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 KRTAP16-1A8MUX0 517 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 TNFSF11O14788 317 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 SLC31A2O15432 143 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 TRAF3IP2O43734 574 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 DEDDO75618 318 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 TSPAN13O95857 204 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 THY1P04216 161 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 HLA-DQB2P05538 268 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 CRYGCP07315 174 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 UBCP0CG48 685 aaKnown RBP3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 DCKP27707 260 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 FMO3P31513 532 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 NPBWR2P48146 333 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 PPOXP50336 477 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 BCAP31P51572 246 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 SELENBP1Q13228 472 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 CLINT1Q14677 625 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 DEFB112Q30KQ8 113 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 PIGGQ5H8A4 983 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 ANKRD26P1Q6NSI1 321 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 Q6ZSR3 168 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 HDDC2Q7Z4H3 204 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 C1orf174Q8IYL3 243 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZCCHC24Q8N2G6 241 aaKnown RBP3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 C14orf178Q8N769 122 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 INO80EQ8NBZ0 244 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 PROKR2Q8NFJ6 384 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR10H4Q8NGA5 316 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR52E2Q8NGJ4 325 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR2A1Q8NGT9 310 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 LYPD6BQ8NI32 183 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 SLC7A13Q8TCU3 470 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 BLOC1S5Q8TDH9 187 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 TMEM246Q9BRR3 403 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 LLPHQ9BRT6 129 aaKnown RBP3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 C1QTNF6Q9BXI9 259 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 KRTAP1-5Q9BYS1 174 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 TPK1Q9H3S4 243 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 FAM96AQ9H5X1 160 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 VNN3Q9NY84 501 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 PAK5Q9P286 719 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 ING4Q9UNL4 249 aa3.42□□□□□ -1.86
HMGB1P23-201ENST00000518743 PCNX3Q9H6A9 2034 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 IGKV3D-11A0A0A0MRZ8 115 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 TRAV39A0A0B4J263 110 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 A0A1B0GU03 582 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 SIGLEC16A6NMB1 481 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 ATP6V1G2-DDX39BF2Z307 99 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 EIF4E2O60573 245 aaKnown RBP3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 HSBP1O75506 76 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 GCM2O75603 506 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 AQP8O94778 261 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 CLIC3O95833 236 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 SRMP19623 302 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 VDAC2P45880 294 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR3A4PP47883 348 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 STXBP1P61764 594 aaKnown RBP3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF92Q03936 586 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 PRPSAP1Q14558 356 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 ITIH4Q14624 930 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 DEFB134Q4QY38 66 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 FBXO48Q5FWF7 155 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 COA6Q5JTJ3 125 aaKnown RBP3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 LY6G6FQ5SQ64 297 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 AVPI1Q5T686 147 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 ZNF470Q6ECI4 717 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 ULK3Q6PHR2 472 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 PUSL1Q8N0Z8 303 aaKnown RBP3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 OTUD6BQ8N6M0 293 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 SPERTQ8NA61 448 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 OR10G9Q8NGN4 311 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 PKNOX2Q96KN3 472 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 KCNS3Q9BQ31 491 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 OSBPL10Q9BXB5 764 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 HAUS4Q9H6D7 363 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 IFNKQ9P0W0 207 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 TAC3Q9UHF0 121 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 STK38LQ9Y2H1 464 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 SLC25A15Q9Y619 301 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 BZW2Q9Y6E2 419 aaKnown RBP3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 KIAA2026Q5HYC2 2103 aa3.41□□□□□ -1.86
HMGB1P23-201ENST00000518743 MUC2Q02817 5179 aa3.4□□□□□ -1.86
HMGB1P23-201ENST00000518743 TRAV6A0A075B6T7 132 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 TRAV40A0A0B4J280 105 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 SERPINE3A8MV23 424 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 C12orf77C9JDV5 145 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 H3BNH8 94 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 EIF3HO15372 352 aaKnown RBP eCLIP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 BCL2L11O43521 198 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 SRP72O76094 671 aaKnown RBP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 MBP02144 154 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR4A8P0C604 315 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 SLC35G6P0C7Q6 338 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms