RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 ING3Q9NXR8 418 aa15.97■□□□□ 0.15
SQSTM1-215ENST00000514093 ZNF256Q9Y2P7 627 aaPredicted RBP15.97■□□□□ 0.15
SQSTM1-215ENST00000514093 STARD9Q9P2P6 4700 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 HYDINQ4G0P3 5121 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 FAM90A18PA6NE21 464 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 FAM90A16PA6NEW6 464 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 FAM90A20PA6NIJ5 464 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 FAM90A9PA6NNJ1 464 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 FAM90A12PA8MX19 464 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 FAM90A5PA8MXJ8 464 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 HMGN1P05114 100 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 FAM90A15PP0C7V4 464 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 FAM90A13PP0C7W8 464 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 FAM90A14PP0C7W9 464 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 FAM90A24PP0C7X0 464 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 TMEM11P17152 192 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 CD34P28906 385 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 ERP29P30040 261 aaKnown RBP15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 GLIPR1P48060 266 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 PRRX1P54821 245 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 ZNF260Q3ZCT1 412 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 TMEM236Q5W0B7 351 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 OVCH2Q7RTZ1 564 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 STPG2Q8N412 459 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 COMMD1Q8N668 190 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 ASB17Q8WXJ9 295 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 CREB3L1Q96BA8 519 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 CCDC134Q9H6E4 229 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 SMAD5-AS1Q9Y6J3 95 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 R4GMQ9 66 aa15.96■□□□□ 0.15
SQSTM1-215ENST00000514093 TCRBV5S2A0A599 114 aa15.95■□□□□ 0.14
SQSTM1-215ENST00000514093 BCL3P20749 454 aa15.95■□□□□ 0.14
SQSTM1-215ENST00000514093 AESQ08117 197 aa15.95■□□□□ 0.14
SQSTM1-215ENST00000514093 THNSL2Q86YJ6 484 aa15.95■□□□□ 0.14
SQSTM1-215ENST00000514093 ENTHD1Q8IYW4 607 aa15.95■□□□□ 0.14
SQSTM1-215ENST00000514093 FAM58AQ8N1B3 248 aa15.95■□□□□ 0.14
SQSTM1-215ENST00000514093 DRAM1Q8N682 238 aa15.95■□□□□ 0.14
SQSTM1-215ENST00000514093 OR8U1Q8NH10 309 aa15.95■□□□□ 0.14
SQSTM1-215ENST00000514093 RPEQ96AT9 228 aa15.95■□□□□ 0.14
SQSTM1-215ENST00000514093 SEBOXQ9HB31 216 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-215ENST00000514093 GLS2Q9UI32 602 aa15.95■□□□□ 0.14
SQSTM1-215ENST00000514093 CCDC182A6NF36 153 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 OOSP1A8MZH6 123 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 ENTPD6O75354 484 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 IGHV3-7P01780 117 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 IGHG2P01859 326 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 PRKACAP17612 351 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 NFYBP25208 207 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 FUT6P51993 359 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 CDK5Q00535 292 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 DIAPH2-AS1Q14236 149 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 KIR2DS1Q14954 304 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 TEX38Q6PEX7 206 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 ZNF322Q6U7Q0 402 aaPredicted RBP15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 Q6ZSR3 168 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 MEPCEQ7L2J0 689 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 FOXRED2Q8IWF2 684 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 DEFB107AQ8IZN7 70 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 CORO2AQ92828 525 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 TOMM40LQ969M1 308 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 ELAC2Q9BQ52 826 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 KRTAP17-1Q9BYP8 105 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 MOB1AQ9H8S9 216 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 TAS2R3Q9NYW6 316 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 TMEM14AQ9Y6G1 99 aa15.94■□□□□ 0.14
SQSTM1-215ENST00000514093 CXCR4P61073 352 aa15.93■□□□□ 0.14
SQSTM1-215ENST00000514093 ZNF146Q15072 292 aa15.93■□□□□ 0.14
SQSTM1-215ENST00000514093 TMEM179BQ7Z7N9 219 aa15.93■□□□□ 0.14
SQSTM1-215ENST00000514093 OR4D6Q8NGJ1 314 aa15.93■□□□□ 0.14
SQSTM1-215ENST00000514093 BORCS8Q96FH0 119 aa15.93■□□□□ 0.14
SQSTM1-215ENST00000514093 MAGIXQ9H6Y5 334 aa15.93■□□□□ 0.14
SQSTM1-215ENST00000514093 PLEKHA1Q9HB21 404 aa15.93■□□□□ 0.14
SQSTM1-215ENST00000514093 ACTR3BQ9P1U1 418 aa15.93■□□□□ 0.14
SQSTM1-215ENST00000514093 CSMD3Q7Z407 3707 aa15.93■□□□□ 0.14
SQSTM1-215ENST00000514093 DHRS7CA6NNS2 312 aa15.92■□□□□ 0.14
SQSTM1-215ENST00000514093 E2F6O75461 281 aa15.92■□□□□ 0.14
SQSTM1-215ENST00000514093 PTGFRP43088 359 aa15.92■□□□□ 0.14
SQSTM1-215ENST00000514093 POU3F4P49335 361 aa15.92■□□□□ 0.14
SQSTM1-215ENST00000514093 PNLIPRP3Q17RR3 467 aa15.92■□□□□ 0.14
SQSTM1-215ENST00000514093 C17orf58Q2M2W7 97 aa15.92■□□□□ 0.14
SQSTM1-215ENST00000514093 ADAMTSL5Q6ZMM2 481 aa15.92■□□□□ 0.14
SQSTM1-215ENST00000514093 LEAP2Q969E1 77 aa15.92■□□□□ 0.14
SQSTM1-215ENST00000514093 TVP23BQ9NYZ1 205 aa15.92■□□□□ 0.14
SQSTM1-215ENST00000514093 GSTK1Q9Y2Q3 226 aa15.92■□□□□ 0.14
SQSTM1-215ENST00000514093 SNX5Q9Y5X3 404 aa15.92■□□□□ 0.14
SQSTM1-215ENST00000514093 A0A087X0M5 115 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 TRBV2A0A0J9YWF9 115 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 A0A1B0GX30 115 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 A0A1W2PPI3 338 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 ODAMA1E959 279 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 FGF16O43320 207 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 RPP14O95059 124 aaKnown RBP15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 OR2H2O95918 312 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 IGKV1D-33P01593 117 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 IGKV1-33P01594 117 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 OSMP13725 252 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 SCN1BQ07699 218 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 Q8IYB0 196 aa15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 CNN2Q99439 309 aaKnown RBP15.91■□□□□ 0.14
SQSTM1-215ENST00000514093 MRM2Q9UI43 246 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms