RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 HDHD2Q9H0R4 259 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 ASCL3Q9NQ33 180 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 RBM12B-AS1Q9P1G2 102 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 FBXL3Q9UKT7 428 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 SLC22A14Q9Y267 594 aa3.18□□□□□ -1.9
HMGB1P47-201ENST00000511281 IGKV2-28A0A075B6P5 120 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 SMLR1H3BR10 107 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 SNAP29O95721 258 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 IGKV2D-28P01615 120 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 IL4P05112 153 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 IGKV5-2P06315 115 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 MPV17P39210 176 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 CCL23P55773 120 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 KRTAP12-2P59991 146 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 SKP1P63208 163 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 HBG1P69891 147 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 HBG2P69892 147 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 ELOCQ15369 112 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 NIPAL1Q6NVV3 410 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 GALNT10Q86SR1 603 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 ITPRIPQ8IWB1 547 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 STK40Q8N2I9 435 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 MIR7-3HGQ8N6C7 128 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 ZDHHC22Q8N966 263 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 PPWD1Q96BP3 646 aaKnown RBP3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 DDIT4LQ96D03 193 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 ZNF514Q96K75 400 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 GPR82Q96P67 336 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 MARVELD1Q9BSK0 173 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 ZNF717Q9BY31 904 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 POMKQ9H5K3 350 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 LINC00574Q9H8X3 128 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 TAC3Q9UHF0 121 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 MYO15BQ96JP2 1530 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 LOXHD1Q8IVV2 1947 aa3.17□□□□□ -1.9
HMGB1P47-201ENST00000511281 ZCCHC6Q5VYS8 1495 aaKnown RBP3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 TMEM150BA6NC51 233 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 GMNCA6NCL1 334 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 I3L4J1 428 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 K7EPK0 472 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 COX7A2P2O60397 106 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 IGHV1-46P01743 117 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 OCMP0CE72 109 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 M6PRP20645 277 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 IMPA1P29218 277 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 ACOT2P49753 483 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 PRDX1Q06830 199 aaKnown RBP3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 ACTBL2Q562R1 376 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 HSP90B2PQ58FF3 399 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 MRPL2Q5T653 305 aaKnown RBP3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 TMEM215Q68D42 235 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 BOD1L2Q8IYS8 172 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 KLF14Q8TD94 323 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 FAM210AQ96ND0 272 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 DERL3Q96Q80 235 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 THTPAQ9BU02 230 aa3.16□□□□□ -1.9
HMGB1P47-201ENST00000511281 KIAA1671Q9BY89 1806 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 TRAV40A0A0B4J280 105 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 FABP12A6NFH5 140 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 FAM183AA6NL82 134 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 COLCA2A8K830 154 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 C9J4A7 227 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 J3QLI3 93 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 PHYHO14832 338 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 AQP9O43315 295 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 TCF21O43680 179 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 CD28P10747 220 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 PRTN3P24158 256 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 EMP2P54851 167 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 LINC00315P59091 139 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 UBE2G2P60604 165 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 FUT5Q11128 374 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 MOBPQ13875 183 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 UBE2NLQ5JXB2 153 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 MED27Q6P2C8 311 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 USP50Q70EL3 339 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 LINC00596Q86U02 117 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 SLC25A45Q8N413 288 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZIC4Q8N9L1 334 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 YIPF6Q96EC8 236 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 PGLYRP3Q96LB9 341 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 UGT2B28Q9BY64 529 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 DHX35Q9H5Z1 703 aaKnown RBP3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 FAM60AQ9NP50 221 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 IMP3Q9NV31 184 aaKnown RBP3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 RWDD2AQ9UIY3 292 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 SCRIBQ14160 1630 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 VWA8A3KMH1 1905 aa3.15□□□□□ -1.91
HMGB1P47-201ENST00000511281 SETD1AO15047 1707 aaKnown RBP3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 IGHV3OR16-8A0A075B7F1 116 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 A8MUU9 505 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 TMEM250H0YL14 139 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 FGF16O43320 207 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 MPZL2O60487 215 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 RAB36O95755 333 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 RD3LP0DJH9 198 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZNF32P17041 273 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 AZU1P20160 251 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms