RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 MARS2Q96GW9 593 aaKnown RBP11.09□□□□□ -0.63
VPS52-218ENST00000482399 UNKLQ9H9P5 680 aaKnown RBP11.09□□□□□ -0.63
VPS52-218ENST00000482399 FSCN3Q9NQT6 498 aa11.09□□□□□ -0.63
VPS52-218ENST00000482399 ROS1P08922 2347 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 CEBPZOSA8MTT3 80 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 C3orf80F5H4A9 247 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 TERTO14746 1132 aaKnown RBP11.08□□□□□ -0.64
VPS52-218ENST00000482399 HS3ST1O14792 307 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 DANCRP0C864 163 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 CD27P26842 260 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 HAAOP46952 286 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 RPS23P62266 143 aaKnown RBP11.08□□□□□ -0.64
VPS52-218ENST00000482399 ADIRFQ15847 76 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 ZNF880Q6PDB4 577 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 HPSE2Q8WWQ2 592 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 MRPL38Q96DV4 380 aaKnown RBP11.08□□□□□ -0.64
VPS52-218ENST00000482399 A0A096LPE4 126 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 A0A1W2PPZ6 126 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 CRYM-AS1A6NIL9 109 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 C2CD4DB7Z1M9 353 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 BMP5P22003 454 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 CCR5P51681 352 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 DYNLT3P51808 116 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 PLPPR5Q32ZL2 321 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 LIAT1Q6ZQX7 453 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 SLC16A14Q7RTX9 510 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 VASH2Q86V25 355 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 LRP11Q86VZ4 500 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 LYZL4Q96KX0 146 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 C1orf147Q96MC9 270 aaPredicted RBP11.08□□□□□ -0.64
VPS52-218ENST00000482399 PLK3Q9H4B4 646 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 CLEC1BQ9P126 229 aa11.08□□□□□ -0.64
VPS52-218ENST00000482399 HEXAP06865 529 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 SEC11BP0C7V7 166 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 RNF224P0DH78 156 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 THBS4P35443 961 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 RND3P61587 244 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 ALKBH2Q6NS38 261 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 PP6455Q8WZ26 134 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 DOCK11Q5JSL3 2073 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 A0A0U1RQK1 487 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 ZNF587BE7ETH6 402 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 NR2C1P13056 603 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 MLF1P58340 268 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 CNN3Q15417 329 aaKnown RBP11.07□□□□□ -0.64
VPS52-218ENST00000482399 LHFPL1Q86WI0 220 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 OSR2Q8N2R0 312 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 TP53RKQ96S44 253 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 CDCA3Q99618 268 aaPredicted RBP11.07□□□□□ -0.64
VPS52-218ENST00000482399 LIME1Q9H400 295 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 BCO1Q9HAY6 547 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 PTRH2Q9Y3E5 179 aaKnown RBP11.07□□□□□ -0.64
VPS52-218ENST00000482399 ARHGAP21Q5T5U3 1957 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 UBE2CO00762 179 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 GAPDHP04406 335 aaKnown RBP11.07□□□□□ -0.64
VPS52-218ENST00000482399 GALNSP34059 522 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 PHYHD1Q5SRE7 291 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 OR8G2PQ6IF36 304 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 DPPA2Q7Z7J5 298 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 MAML2Q8IZL2 1156 aaPredicted RBP11.07□□□□□ -0.64
VPS52-218ENST00000482399 OR6X1Q8NH79 312 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 RPUSD4Q96CM3 377 aaKnown RBP11.07□□□□□ -0.64
VPS52-218ENST00000482399 POM121Q96HA1 1249 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 WBP1LQ9NX94 342 aa11.07□□□□□ -0.64
VPS52-218ENST00000482399 METTL1Q9UBP6 276 aaKnown RBP11.07□□□□□ -0.64
VPS52-218ENST00000482399 STRAPQ9Y3F4 350 aaKnown RBP11.07□□□□□ -0.64
VPS52-218ENST00000482399 IGHV1OR15-9A0A0B4J2B8 117 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 C3orf85A0A1B0GTC6 90 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 KLK3P07288 261 aaPredicted RBP11.06□□□□□ -0.64
VPS52-218ENST00000482399 RPS2P15880 293 aaKnown RBP11.06□□□□□ -0.64
VPS52-218ENST00000482399 ZP4Q12836 540 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 SPNS3Q6ZMD2 512 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 CHST5Q9GZS9 411 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 SMCO3A2RU48 225 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 CHST1O43916 411 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 IGHMP01871 453 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 ZNF32P17041 273 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 TCN2P20062 427 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 S100GP29377 79 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 CFHR1Q03591 330 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 OR10AD1Q8NGE0 317 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 RASL10BQ96S79 203 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 SPIN2AQ99865 258 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 SPIN2BQ9BPZ2 258 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 MRPL13Q9BYD1 178 aaKnown RBP11.06□□□□□ -0.64
VPS52-218ENST00000482399 SLC25A31Q9H0C2 315 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 SLC7A10Q9NS82 523 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 UFSP2Q9NUQ7 469 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 AAED1Q7RTV5 226 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 TBC1D26Q86UD7 250 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 LFNGQ8NES3 379 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 POC1BQ8TC44 478 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 HIST1H2AAQ96QV6 131 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 CABLES2Q9BTV7 478 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 PRRG4Q9BZD6 226 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 POMT1Q9Y6A1 747 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 DOCK10Q96BY6 2186 aa11.06□□□□□ -0.64
VPS52-218ENST00000482399 A0A1B0GV90 55 aa11.05□□□□□ -0.64
VPS52-218ENST00000482399 TSTD3H0UI37 97 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms