RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	TSPAN14	Q8NG11	270 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	OR52N4	Q8NGI2	321 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	KCNG3	Q8TAE7	436 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	TNFRSF14	Q92956	283 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	DVL3	Q92997	716 aa	Predicted RBP	4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525		Q96M66	194 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	CMTM3	Q96MX0	182 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	JMJD8	Q96S16	334 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	S100A13	Q99584	98 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	TM2D1	Q9BX74	207 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	TMPRSS13	Q9BYE2	586 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	SIRPD	Q9H106	197 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	METTL9	Q9H1A3	318 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	WDR13	Q9H1Z4	485 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	RIMS4	Q9H426	269 aa	Predicted RBP	4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	METTL8	Q9H825	291 aa	Known RBP	4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	CNTD2	Q9H8S5	307 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	EXOSC4	Q9NPD3	245 aa	Known RBP	4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	NOX4	Q9NPH5	578 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	TAS2R4	Q9NYW5	299 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	HSF4	Q9ULV5	492 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	MGAT4A	Q9UM21	535 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	STUB1	Q9UNE7	303 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	AUP1	Q9Y679	476 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	SVEP1	Q4LDE5	3571 aa		4.21	□□□□□ -1.74
HDAC6-223	ENST00000480525	COL6A5	A8TX70	2615 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	TRAV8-7	A0A075B6U6	113 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	TRBV6-6	A0A0A6YYG2	114 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	hADV38S2	A0JD32	116 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	RFPL4A	A6NLU0	287 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	TMEM14DP	A8MWL7	114 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	C22orf46	C9J442	243 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	C3orf80	F5H4A9	247 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	RFPL4AL1	F8VTS6	287 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	LDLRAD4	O15165	306 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	ORC5	O43913	435 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	FCN3	O75636	299 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	IL1A	P01583	271 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	CSTB	P04080	98 aa	Known RBP	4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	SFTPB	P07988	381 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	TMEM225B	P0DP42	221 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	CALCB	P10092	127 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	GZMH	P20718	246 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	HTR2C	P28335	458 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	CD80	P33681	288 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	RPL31	P62899	125 aa	Known RBP	4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	QRFP	P83859	136 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	FABP5	Q01469	135 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	BLMH	Q13867	455 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	P2RY14	Q15391	338 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	RSU1	Q15404	277 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	ODF4	Q2M2E3	257 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	MIDN	Q504T8	468 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	METTL11B	Q5VVY1	283 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	STEAP3	Q658P3	488 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	OR52W1	Q6IF63	320 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525		Q6P435	159 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	HEPN1	Q6WQI6	88 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	C17orf107	Q6ZR85	190 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	CEACAM19	Q7Z692	300 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	RTN4RL2	Q86UN3	420 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	ANGPTL5	Q86XS5	388 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	OSR2	Q8N2R0	312 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	CD177	Q8N6Q3	437 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	DTX3	Q8N9I9	347 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	OR52M1	Q8NGK5	317 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	TNFAIP8L1	Q8WVP5	186 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	SGCD	Q92629	289 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	EMG1	Q92979	244 aa	Known RBP	4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	CREB3L1	Q96BA8	519 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	KCTD12	Q96CX2	325 aa	Known RBP	4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	KCTD7	Q96MP8	289 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	WDFY2	Q96P53	400 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	GPER1	Q99527	375 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	MRPS26	Q9BYN8	205 aa	Known RBP	4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	BARHL1	Q9BZE3	327 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	CCDC90B	Q9GZT6	254 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	GHITM	Q9H3K2	345 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	GAL3ST2	Q9H3Q3	398 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	PPP1R3E	Q9H7J1	279 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	LPAR2	Q9HBW0	351 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	RBFOX1	Q9NWB1	397 aa	Known RBP	4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	OR6C3	Q9NZP0	311 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	SSR3	Q9UNL2	185 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	POMT1	Q9Y6A1	747 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525		V9GY05	133 aa		4.2	□□□□□ -1.74
HDAC6-223	ENST00000480525	MAGEA13P	A6NCF6	341 aa		4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525	ZNF729	A6NN14	1252 aa	Predicted RBP	4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525	IFITM5	A6NNB3	132 aa		4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525	FOXI3	A8MTJ6	420 aa	Predicted RBP	4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525	NOTO	A8MTQ0	251 aa		4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525	VGLL3	A8MV65	326 aa		4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525	OOSP1	A8MZH6	123 aa		4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525	NPIPB11	E5RHQ5	1161 aa		4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525		F8VVB4	439 aa		4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525		F8VWA3	439 aa		4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525	ZNF701	M0R085	212 aa	Predicted RBP	4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525	SLC33A1	O00400	549 aa	Predicted RBP	4.19	□□□□□ -1.74
HDAC6-223	ENST00000480525	ITGB1BP1	O14713	200 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms