RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 OR11H6Q8NGC7 330 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 OR5D14Q8NGL3 314 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 OR13D1Q8NGV5 346 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 CNIH3Q8TBE1 160 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 RGP1Q92546 391 aaPredicted RBP15.34■□□□□ 0.05
COL5A1-203ENST00000460264 EXOSC4Q9NPD3 245 aaKnown RBP15.34■□□□□ 0.05
COL5A1-203ENST00000460264 DHDHQ9UQ10 334 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 WNK1Q9H4A3 2382 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 SH2D1BO14796 132 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 OR2H2O95918 312 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 ARG1P05089 322 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 ETV1P50549 477 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 GTF2A1P52655 376 aaPredicted RBP15.33■□□□□ 0.04
COL5A1-203ENST00000460264 P2RX3P56373 397 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 ZP1P60852 638 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 KISS1Q15726 138 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 KIAA2026Q5HYC2 2103 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 ZNF626Q68DY1 528 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 XAF1Q6GPH4 301 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 DYNAPQ8N1N2 210 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 PIFOQ8TCI5 191 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 CYGBQ8WWM9 190 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 RHOFQ9HBH0 211 aa15.33■□□□□ 0.04
COL5A1-203ENST00000460264 TBL2Q9Y4P3 447 aaKnown RBP15.33■□□□□ 0.04
COL5A1-203ENST00000460264 VGLL3A8MV65 326 aa15.32■□□□□ 0.04
COL5A1-203ENST00000460264 DCKP27707 260 aa15.32■□□□□ 0.04
COL5A1-203ENST00000460264 ERP29P30040 261 aaKnown RBP15.32■□□□□ 0.04
COL5A1-203ENST00000460264 IL18R1Q13478 541 aa15.32■□□□□ 0.04
COL5A1-203ENST00000460264 LDLRAD2Q5SZI1 272 aa15.32■□□□□ 0.04
COL5A1-203ENST00000460264 SLC35E4Q6ICL7 350 aa15.32■□□□□ 0.04
COL5A1-203ENST00000460264 ZNF529Q6P280 563 aa15.32■□□□□ 0.04
COL5A1-203ENST00000460264 PPP1R35Q8TAP8 253 aa15.32■□□□□ 0.04
COL5A1-203ENST00000460264 RPS4Y2Q8TD47 263 aa15.32■□□□□ 0.04
COL5A1-203ENST00000460264 FOXRED1Q96CU9 486 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-203ENST00000460264 C8orf4Q9NR00 106 aa15.32■□□□□ 0.04
COL5A1-203ENST00000460264 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.32■□□□□ 0.04
COL5A1-203ENST00000460264 PCDHGB5Q9Y5G0 923 aa15.32■□□□□ 0.04
COL5A1-203ENST00000460264 CHST1O43916 411 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 TMEM225BP0DP42 221 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 LMO1P25800 156 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 GABRA5P31644 462 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 CDK5R1Q15078 307 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 RCN1Q15293 331 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 CCDC58Q4VC31 144 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 OR2G6Q5TZ20 316 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 ASPHD2Q6ICH7 369 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 RPL22L1Q6P5R6 122 aaKnown RBP15.31■□□□□ 0.04
COL5A1-203ENST00000460264 PACRGLQ8N7B6 248 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 RAB18Q9NP72 206 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 DIMT1Q9UNQ2 313 aaKnown RBP15.31■□□□□ 0.04
COL5A1-203ENST00000460264 UBE2J1Q9Y385 318 aaPredicted RBP15.31■□□□□ 0.04
COL5A1-203ENST00000460264 SESN1Q9Y6P5 492 aa15.31■□□□□ 0.04
COL5A1-203ENST00000460264 IRGMA1A4Y4 181 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 M0QZ24 198 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 TIMM23O14925 209 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 RAB3AP20336 220 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 SOX2P48431 317 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 DYNC1I2Q13409 638 aaKnown RBP15.3■□□□□ 0.04
COL5A1-203ENST00000460264 PLA1AQ53H76 456 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 TTC23Q5W5X9 447 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 Q6P435 159 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 TMPRSS11AQ6ZMR5 421 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 LIAT1Q6ZQX7 453 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 TRAPPC6BQ86SZ2 158 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 CHST4Q8NCG5 386 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 SETD9Q8NE22 299 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 OR51A2Q8NGJ7 313 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 OR4C13Q8NGP0 309 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 GPR148Q8TDV2 347 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 MALSU1Q96EH3 234 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 CPNE2Q96FN4 548 aaPredicted RBP15.3■□□□□ 0.04
COL5A1-203ENST00000460264 RANBP3Q9H6Z4 567 aaPredicted RBP15.3■□□□□ 0.04
COL5A1-203ENST00000460264 TCF7L1Q9HCS4 588 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 FBLN5Q9UBX5 448 aa15.3■□□□□ 0.04
COL5A1-203ENST00000460264 IGHV2-26A0A0B4J1V2 119 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 MEGF11A6BM72 1044 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 MMP23AO75900 390 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 CSN2P05814 226 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 ZNF44P15621 663 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 MYL12AP19105 171 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 ADARB1P78563 741 aaKnown RBP15.29■□□□□ 0.04
COL5A1-203ENST00000460264 SCN1BQ07699 218 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 FAM189A2Q15884 450 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 SSX2Q16385 188 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 TMEM133Q9H2Q1 129 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 TAS2R4Q9NYW5 299 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 SIGLEC9Q9Y336 463 aa15.29■□□□□ 0.04
COL5A1-203ENST00000460264 EXOSC1Q9Y3B2 195 aaKnown RBP15.29■□□□□ 0.04
COL5A1-203ENST00000460264 SIRT4Q9Y6E7 314 aaPredicted RBP15.29■□□□□ 0.04
COL5A1-203ENST00000460264 TET2Q6N021 2002 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-203ENST00000460264 TRGV10A0A0A0MS01 117 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 A0A0G2JK05 382 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 FUOMA2VDF0 154 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 SLC33A1O00400 549 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-203ENST00000460264 GABRPO00591 440 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 CD2P06729 351 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 GLIPR1P48060 266 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 MTNR1BP49286 362 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 AESQ08117 197 aa15.28■□□□□ 0.04
COL5A1-203ENST00000460264 MINOS1Q5TGZ0 78 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms