RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 ST3GAL2Q16842 350 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 TBC1D28Q2M2D7 210 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 ZNF684Q5T5D7 378 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 C1QL3Q5VWW1 255 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 AMMECR1LQ6DCA0 310 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 GRHL2Q6ISB3 625 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 GLB1LQ6UWU2 654 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 PLXDC2Q6UX71 529 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 ZNF66Q6ZN08 573 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 SEM1Q6ZVN7 128 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 DOK3Q7L591 496 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 HIST3H2AQ7L7L0 130 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 CALHM3Q86XJ0 350 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 SAXO1Q8IYX7 474 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 Q8N1Y9 231 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 MUC20Q8N307 709 aaPredicted RBP4.31□□□□□ -1.72
EPHA3-202ENST00000452448 ZNF439Q8NDP4 499 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 GPR26Q8NDV2 337 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 OR5D16Q8NGK9 328 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 OR10S1Q8NGN2 331 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 OR1J4Q8NGS1 313 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 OR6N2Q8NGY6 317 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 MFSD8Q8NHS3 518 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 SOCS4Q8WXH5 440 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 HIST1H2ACQ93077 130 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 IL22RA2Q969J5 263 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 TMEM106AQ96A25 262 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 TMEM18Q96B42 140 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 KIRREL1Q96J84 757 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 YPEL4Q96NS1 127 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 DUSP21Q9H596 190 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 CWH43Q9H720 699 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 SERTAD4Q9NUC0 356 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 DCAF13Q9NV06 445 aaKnown RBP4.31□□□□□ -1.72
EPHA3-202ENST00000452448 SLC25A37Q9NYZ2 338 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 VAX2Q9UIW0 290 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 COA3Q9Y2R0 106 aaPredicted RBP4.31□□□□□ -1.72
EPHA3-202ENST00000452448 LSM5Q9Y4Y9 91 aaKnown RBP4.31□□□□□ -1.72
EPHA3-202ENST00000452448 NRXN2Q9P2S2 1712 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 RLFQ13129 1914 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 hCG_1818297A0A087WSY0 165 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 IDSB3KWA1 339 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 F5H5P2 479 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 H3BQ15 152 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 HSBP1O75506 76 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 TRAPPC6AO75865 159 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 TRGC2P03986 189 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 P04436 131 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 BCKDHAP12694 445 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 CD58P19256 250 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 HIST1H1TP22492 207 aaPredicted RBP4.31□□□□□ -1.72
EPHA3-202ENST00000452448 COL8A1P27658 744 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 GNG4P50150 75 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 OSTNP61366 133 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 RPS25P62851 125 aaKnown RBP4.31□□□□□ -1.72
EPHA3-202ENST00000452448 POM121L1PQ3SYA9 428 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 HIST2H2BCQ6DN03 193 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 HIST2H2BDQ6DRA6 164 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 FAM159AQ6UWV7 190 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 ALKAL1Q6UXT8 129 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 ADAMTSL5Q6ZMM2 481 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 MAVSQ7Z434 540 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 ACVR1CQ8NER5 493 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 OR5AP2Q8NGF4 316 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 NDRG1Q92597 394 aaKnown RBP4.31□□□□□ -1.72
EPHA3-202ENST00000452448 RSPRY1Q96DX4 576 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 PELI1Q96FA3 418 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 MBOAT4Q96T53 435 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 RETNQ9HD89 108 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 MARCH5Q9NX47 278 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 TAS2R16Q9NYV7 291 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 TAS2R8Q9NYW2 309 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 KIAA1456Q9P272 454 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 RPS6KB2Q9UBS0 482 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 KLK11Q9UBX7 282 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 HS3ST2Q9Y278 367 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 HDGFL3Q9Y3E1 203 aa4.31□□□□□ -1.72
EPHA3-202ENST00000452448 FER1L6Q2WGJ9 1857 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 FXYD6-FXYD2A0A087WZ82 144 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 IGHV1-69-2A0A0G2JMI3 117 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 A0A1B0GTI1 187 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 A0A1W2PPI3 338 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 GAGE12JA6NER3 117 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 MSGN1A6NI15 193 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 B4DEV8 164 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 G3V2L1 256 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 MFNGO00587 321 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 NKX2-8O15522 239 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 EEDO75530 441 aaKnown RBP4.3□□□□□ -1.72
EPHA3-202ENST00000452448 GAGE7O76087 117 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 MT-CO3P00414 261 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 HLA-AP01891 365 aaKnown RBP4.3□□□□□ -1.72
EPHA3-202ENST00000452448 IGLC1P0CG04 106 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 GAGE12FP0CL80 117 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 GAGE12GP0CL81 117 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 GAGE12IP0CL82 117 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 MAOAP21397 527 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 GABRA3P34903 492 aa4.3□□□□□ -1.72
EPHA3-202ENST00000452448 HINT1P49773 126 aaPredicted RBP4.3□□□□□ -1.72
EPHA3-202ENST00000452448 PDX1P52945 283 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 209.7 ms