RNA–Protein interactions for RNA: ENST00000448833.5

VPS41-208, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 1 (best)

Gene VPS41, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-208ENST00000448833 OR4D6Q8NGJ1 314 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 OR5D14Q8NGL3 314 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 OR2G2Q8NGZ5 317 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 NDNFQ8TB73 568 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 CORO2AQ92828 525 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 SLAMF9Q96A28 289 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 EME1Q96AY2 570 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 FGGYQ96C11 551 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 Q96MT0 163 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 OPALINQ96PE5 141 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 RIBC2Q9H4K1 309 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 LIN7BQ9HAP6 207 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 HMG20AQ9NP66 347 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 EXOSC4Q9NPD3 245 aaKnown RBP5.71□□□□□ -1.5
VPS41-208ENST00000448833 PCDHB16Q9NRJ7 776 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 SERTAD4Q9NUC0 356 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 DPM3Q9P2X0 92 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 FOXJ3Q9UPW0 622 aa5.71□□□□□ -1.5
VPS41-208ENST00000448833 IGHV2-26A0A0B4J1V2 119 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 FAM90A22PA8MWA6 464 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 SLC16A6O15403 523 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 MAGEB3O15480 346 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 CHST1O43916 411 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 DUS4LO95620 317 aaKnown RBP5.7□□□□□ -1.5
VPS41-208ENST00000448833 CLIC3O95833 236 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 FADS2O95864 444 aaKnown RBP5.7□□□□□ -1.5
VPS41-208ENST00000448833 CSN2P05814 226 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 HTR1AP08908 422 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 FAM106CPP0CH98 169 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 PRKACAP17612 351 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 VDAC2P45880 294 aaPredicted RBP5.7□□□□□ -1.5
VPS41-208ENST00000448833 RAB13P51153 203 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 P2RX3P56373 397 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 ISL1P61371 349 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 SNRPGP62308 76 aaKnown RBP5.7□□□□□ -1.5
VPS41-208ENST00000448833 BDH1Q02338 343 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 ZNF91Q05481 1191 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 BEAN1Q3B7T3 259 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 TP53I3Q53FA7 332 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 SAMD5Q5TGI4 173 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 ZFP1Q6P2D0 407 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 SSX6Q7RTT6 188 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 LHFPL4Q7Z7J7 247 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 AMIGO2Q86SJ2 522 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 SERPINA12Q8IW75 414 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 ABHD12Q8N2K0 398 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 PRSS35Q8N3Z0 413 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 OR13C3Q8NGS6 347 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 R3HDM4Q96D70 268 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 HRASLS5Q96KN8 279 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 MBOAT4Q96T53 435 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 WNT10AQ9GZT5 417 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 NCOR1P1Q9H4R4 102 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 ZCCHC4Q9H5U6 513 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 ZNF702PQ9H963 129 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 INPP5EQ9NRR6 644 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 OR6C3Q9NZP0 311 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 FRRS1LQ9P0K9 344 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 OAZ3Q9UMX2 235 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 SIGLEC9Q9Y336 463 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 HILPDAQ9Y5L2 63 aa5.7□□□□□ -1.5
VPS41-208ENST00000448833 IGKV1-27A0A075B6S5 117 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 TMEM82A0PJX8 343 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 TMEM212A6NML5 194 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 ZNF729A6NN14 1252 aaPredicted RBP5.69□□□□□ -1.5
VPS41-208ENST00000448833 F8VVB4 439 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 F8VWA3 439 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 J3QLW9 94 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 M0R129 80 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 DEGS1O15121 323 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 PSPNO60542 156 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 ENTPD6O75354 484 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 KDM4BO94953 1096 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 INMTO95050 263 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 IGHA1P01876 353 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 ALPLP05186 524 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 CCDC159P0C7I6 412 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 ZNF44P15621 663 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 ZNF19P17023 458 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 CD33P20138 364 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 BCL3P20749 454 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 CD34P28906 385 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 C21orf33P30042 268 aaPredicted RBP5.69□□□□□ -1.5
VPS41-208ENST00000448833 PTGFRP43088 359 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 NPBWR2P48146 333 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 KCNJ3P48549 501 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 POU3F4P49335 361 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 ZNF85Q03923 595 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 NSUN5P1Q3KNT7 163 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 PLA1AQ53H76 456 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 CCBE1Q6UXH8 406 aaPredicted RBP5.69□□□□□ -1.5
VPS41-208ENST00000448833 SLC16A12Q6ZSM3 486 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 TMEM219Q86XT9 240 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 C1QL4Q86Z23 238 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 RDH10Q8IZV5 341 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 BATF2Q8N1L9 274 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 DYNAPQ8N1N2 210 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 SYS1Q8N2H4 156 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 C11orf44Q8N8P7 122 aa5.69□□□□□ -1.5
VPS41-208ENST00000448833 OR5AU1Q8NGC0 362 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms