RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 HPSE2Q8WWQ2 592 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 ST8SIA4Q92187 359 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 RNASE6Q93091 150 aaKnown RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 MED30Q96HR3 178 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 ARHGAP5-AS1Q96IT6 56 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 RADILQ96JH8 1075 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 SCGB3A2Q96PL1 93 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 NEDD4LQ96PU5 975 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 SLC25A21Q9BQT8 299 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 NICN1Q9BSH3 213 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 ADAT1Q9BUB4 502 aaKnown RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 PECRQ9BY49 303 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 KRTAP4-8Q9BYQ9 185 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 CXXC4Q9H2H0 198 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 RIMS4Q9H426 269 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 ESRP2Q9H6T0 727 aaKnown RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 IFT22Q9H7X7 185 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 KCNJ16Q9NPI9 418 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 MCUBQ9NWR8 336 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 NLKQ9UBE8 527 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 KLK11Q9UBX7 282 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 NDRG3Q9UGV2 375 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 GLS2Q9UI32 602 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 SH3BGRL2Q9UJC5 107 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 ERRFI1Q9UJM3 462 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 SCP2D1Q9UJQ7 156 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZDHHC8Q9ULC8 765 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 EDARQ9UNE0 448 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 ST3GAL6Q9Y274 331 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 KCNK7Q9Y2U2 307 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 EPG5Q9HCE0 2579 aa3.38□□□□□ -1.87
HMGB1P37-201ENST00000439613 BSNQ9UPA5 3926 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 ADGRG4Q8IZF6 3080 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 IGLV3-9A0A075B6K5 115 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 IGKV1-12A0A0C4DH73 117 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 HMX3A6NHT5 357 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 DBX1A6NMT0 343 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 MCRIP1C9JLW8 97 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 SH2D1BO14796 132 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 GEMIN2O14893 280 aaKnown RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 SSX4O60224 188 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 SSX5O60225 188 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 PDCD6O75340 191 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 PEX14O75381 377 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 NDUFB6O95139 128 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 IGKV1D-12P01611 117 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 CD3DP04234 171 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 PTHLHP12272 177 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 BCL3P20749 454 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 AGAP20933 346 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 TNFSF4P23510 183 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 DTYMKP23919 212 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 GABRR1P24046 479 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 CHATP28329 748 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 CALCRP30988 508 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 BTCP35070 178 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 MPV17P39210 176 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 CD200P41217 278 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR3A3P47888 321 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 LINC00310P59036 64 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 SORDQ00796 357 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 LY6DQ14210 128 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 RBM39Q14498 530 aaKnown RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 IL13RA2Q14627 380 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 CDK10Q15131 360 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 RBMS2Q15434 407 aaKnown RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 GRK1Q15835 563 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 TAF9Q16594 264 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 SRSF7Q16629 238 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 CHRFAM7AQ494W8 412 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 RNASE10Q5GAN6 216 aaKnown RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 DMRTC1Q5HYR2 192 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 TMEM255AQ5JRV8 349 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 PLAC9Q5JTB6 97 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 SPIN3Q5JUX0 258 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 METTL11BQ5VVY1 283 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 CD276Q5ZPR3 534 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 SFRP4Q6FHJ7 346 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 HAGHLQ6PII5 290 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZNF554Q86TJ5 538 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 AKAP14Q86UN6 197 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 HOGA1Q86XE5 327 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 FAM90A1Q86YD7 464 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 BPIFB2Q8N4F0 458 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 ARRDC1Q8N5I2 433 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 SCCPDHQ8NBX0 429 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR10AD1Q8NGE0 317 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR4C16Q8NGL9 310 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR5H2Q8NGV7 314 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR10Z1Q8NGY1 313 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR4K15Q8NH41 348 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 CA5BP1Q8WTZ4 195 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 CCDC107Q8WV48 283 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 TMEM171Q8WVE6 324 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 NUDCD2Q8WVJ2 157 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 GTF3AQ92664 365 aaKnown RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 GCDHQ92947 438 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 EMG1Q92979 244 aaKnown RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 SLAMF9Q96A28 289 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 NKX3-1Q99801 234 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms