RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SAMD5Q5TGI4 173 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 Q6P435 159 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 LIAT1Q6ZQX7 453 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 FAM220AQ7Z4H9 259 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 OR4P4Q8NGL7 312 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 OR13C9Q8NGT0 318 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 C4orf36Q96KX1 117 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 WNT10AQ9GZT5 417 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 TMEM133Q9H2Q1 129 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 AMBNQ9NP70 447 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 RAB18Q9NP72 206 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 SESN1Q9Y6P5 492 aa13.72□□□□□ -0.21
CPSF4-203ENST00000430038 FAM172BPA6NC97 362 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 MGST3O14880 152 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 HTR1AP08908 422 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 LMO1P25800 156 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 CCR9P51686 369 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 DYNLT3P51808 116 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 NSUN5P1Q3KNT7 163 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 PRAMEF5Q5TYX0 476 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 KCTD20Q7Z5Y7 419 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 ENTHD1Q8IYW4 607 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 CBR4Q8N4T8 237 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 RPS4Y2Q8TD47 263 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 OPALINQ96PE5 141 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 OCSTAMPQ9BR26 566 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 MMP28Q9H239 520 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 IMPAD1Q9NX62 359 aa13.71□□□□□ -0.21
CPSF4-203ENST00000430038 A0A0G2JK05 382 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 CIB2O75838 187 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 KDM4BO94953 1096 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 MT-ND2P03891 347 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 ZNF20P17024 532 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 PRKACBP22694 351 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 ERP29P30040 261 aaKnown RBP13.7□□□□□ -0.22
CPSF4-203ENST00000430038 ALDH3A2P51648 485 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 P2RX3P56373 397 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 ALKBH1Q13686 389 aaKnown RBP13.7□□□□□ -0.22
CPSF4-203ENST00000430038 CDK5R1Q15078 307 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 KPRPQ5T749 579 aaPredicted RBP13.7□□□□□ -0.22
CPSF4-203ENST00000430038 C11orf88Q6PI97 169 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 LHFPL2Q6ZUX7 228 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 Q8IYB0 196 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 ACBD7Q8N6N7 88 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 COQ2Q96H96 371 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 CITED2Q99967 270 aaPredicted RBP13.7□□□□□ -0.22
CPSF4-203ENST00000430038 COMMD4Q9H0A8 199 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 HHLA2Q9UM44 414 aa13.7□□□□□ -0.22
CPSF4-203ENST00000430038 ZFPL1O95159 310 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 DBTP11182 482 aaKnown RBP13.69□□□□□ -0.22
CPSF4-203ENST00000430038 ZP1P60852 638 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 SLC34A1Q06495 639 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 IL18R1Q13478 541 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 OXLD1Q5BKU9 147 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 SPIN3Q5JUX0 258 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 MINOS1Q5TGZ0 78 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 MEDAGQ5VYS4 303 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 OR13C3Q8NGS6 347 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 RHOXF1Q8NHV9 184 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 CORO2AQ92828 525 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 FOXRED1Q96CU9 486 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-203ENST00000430038 CLEC7AQ9BXN2 247 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 ZNF286AQ9HBT8 521 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 ABCB10Q9NRK6 738 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 ING3Q9NXR8 418 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 ZNF581Q9P0T4 197 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 MINOS1-NBL1R4GNA1 71 aa13.69□□□□□ -0.22
CPSF4-203ENST00000430038 SLC33A1O00400 549 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-203ENST00000430038 SH2D1BO14796 132 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 FBXO24O75426 580 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 IGLV1-47P01700 117 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 CDK2P24941 298 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 GTF2A1P52655 376 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-203ENST00000430038 SCN1BQ07699 218 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 GALEQ14376 348 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 C17orf58Q2M2W7 97 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 TCTEX1D4Q5JR98 221 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 ABHD12Q8N2K0 398 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 NDNFQ8TB73 568 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 APH1BQ8WW43 257 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 RGP1Q92546 391 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-203ENST00000430038 SPSB1Q96BD6 273 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 PDCD1LG2Q9BQ51 273 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 ALG8Q9BVK2 526 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 PPIL3Q9H2H8 161 aaKnown RBP13.68□□□□□ -0.22
CPSF4-203ENST00000430038 ZCCHC4Q9H5U6 513 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 EXOSC4Q9NPD3 245 aaKnown RBP13.68□□□□□ -0.22
CPSF4-203ENST00000430038 ERVK13-1Q9NX77 482 aa13.68□□□□□ -0.22
CPSF4-203ENST00000430038 UBE2J1Q9Y385 318 aaPredicted RBP13.68□□□□□ -0.22
CPSF4-203ENST00000430038 SH2D7A6NKC9 451 aaPredicted RBP13.67□□□□□ -0.22
CPSF4-203ENST00000430038 LY6LH3BQJ8 138 aa13.67□□□□□ -0.22
CPSF4-203ENST00000430038 AMY1AP04745 511 aa13.67□□□□□ -0.22
CPSF4-203ENST00000430038 AMY2AP04746 511 aa13.67□□□□□ -0.22
CPSF4-203ENST00000430038 CGB3P0DN86 165 aa13.67□□□□□ -0.22
CPSF4-203ENST00000430038 CGB7P0DN87 165 aa13.67□□□□□ -0.22
CPSF4-203ENST00000430038 XAF1Q6GPH4 301 aa13.67□□□□□ -0.22
CPSF4-203ENST00000430038 C10orf99Q6UWK7 81 aa13.67□□□□□ -0.22
CPSF4-203ENST00000430038 HEPN1Q6WQI6 88 aa13.67□□□□□ -0.22
CPSF4-203ENST00000430038 TRAPPC6BQ86SZ2 158 aa13.67□□□□□ -0.22
CPSF4-203ENST00000430038 OR51A2Q8NGJ7 313 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms