RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 LHFPL5Q8TAF8 219 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 APOBEC3DQ96AK3 386 aaPredicted RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 ZNF207O43670 478 aaKnown RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 TBX19O60806 448 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 VSIG10L2P0DP72 767 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 PNLIPP16233 465 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 EWSR1Q01844 656 aaKnown RBP eCLIP10.66□□□□□ -0.7
UBR4-205ENST00000417040 DEFB109BQ30KR1 87 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 HLA-BQ31612 363 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 LIAT1Q6ZQX7 453 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 SLC25A42Q86VD7 318 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 GAPTQ8N292 157 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 MUC15Q8N387 334 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 GPA33Q99795 319 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 SIRT4Q9Y6E7 314 aaPredicted RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 IGHV5-51A0A0C4DH38 117 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 NKX2-6A6NCS4 301 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 F5H697 171 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 SNRPCP09234 159 aaKnown RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 SUCLG1P53597 346 aaKnown RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 LYZP61626 148 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 PABPC1L2AQ5JQF8 200 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 OR4P4Q8NGL7 312 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 OR1L3Q8NH93 324 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 RPS4Y2Q8TD47 263 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 EDARADDQ8WWZ3 215 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 ASB10Q8WXI3 467 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 HSD17B10Q99714 261 aaKnown RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 KIAA1551Q9HCM1 1747 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 FBLL1A6NHQ2 334 aaKnown RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 OR5B21A6NL26 309 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 CBR3O75828 277 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 MUC1P15941 1255 aaPredicted RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 GALNSP34059 522 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 IFITM2Q01629 132 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 FAM53BQ14153 422 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 PIGYQ3MUY2 71 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 SPACA9Q96E40 222 aaPredicted RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 MS4A3Q96HJ5 214 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 ZNF576Q9H609 170 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 AAMDCQ9H7C9 122 aa10.66□□□□□ -0.7
UBR4-205ENST00000417040 AKIRIN1Q9H9L7 192 aaPredicted RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 MBD1Q9UIS9 605 aaPredicted RBP10.66□□□□□ -0.7
UBR4-205ENST00000417040 SLX4Q8IY92 1834 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 SP1P08047 785 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 OR10J1P30954 320 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 OR3A1P47881 315 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 PSMB2P49721 201 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 NPEPL1Q8NDH3 523 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 OR5AU1Q8NGC0 362 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 ZPLD1Q8TCW7 415 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 SPSB1Q96BD6 273 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 GAL3ST2Q9H3Q3 398 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 ELF5Q9UKW6 265 aaPredicted RBP10.65□□□□□ -0.7
UBR4-205ENST00000417040 HRASP01112 189 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 ZNF137PP52743 207 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 IRF3Q14653 427 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 LOXL2Q9Y4K0 774 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 GP1BAP07359 652 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 MGAT2Q10469 447 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 TBX15Q96SF7 602 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 P4HTMQ9NXG6 502 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 TECRQ9NZ01 308 aaKnown RBP10.65□□□□□ -0.7
UBR4-205ENST00000417040 C3orf80F5H4A9 247 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 RRP8O43159 456 aaKnown RBP10.65□□□□□ -0.7
UBR4-205ENST00000417040 OR8A1Q8NGG7 326 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 PLA2G2FQ9BZM2 168 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 CCL28Q9NRJ3 127 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 GPR27Q9NS67 375 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 UFC1Q9Y3C8 167 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 BCORQ6W2J9 1755 aa10.65□□□□□ -0.7
UBR4-205ENST00000417040 ID4P47928 161 aa10.65□□□□□ -0.71
UBR4-205ENST00000417040 UQCRFS1P47985 274 aa10.65□□□□□ -0.71
UBR4-205ENST00000417040 ZNF83P51522 516 aa10.65□□□□□ -0.71
UBR4-205ENST00000417040 PSG5Q15238 335 aa10.65□□□□□ -0.71
UBR4-205ENST00000417040 ABHD3Q8WU67 409 aa10.65□□□□□ -0.71
UBR4-205ENST00000417040 STARD4Q96DR4 205 aa10.65□□□□□ -0.71
UBR4-205ENST00000417040 PIK3IP1Q96FE7 263 aa10.65□□□□□ -0.71
UBR4-205ENST00000417040 TIMD4Q96H15 378 aa10.65□□□□□ -0.71
UBR4-205ENST00000417040 STARD10Q9Y365 291 aa10.65□□□□□ -0.71
UBR4-205ENST00000417040 TMEM127O75204 238 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 GNG3P63215 75 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 SLC35B1P78383 322 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 ELOBQ15370 118 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 ZNF770Q6IQ21 691 aaPredicted RBP10.64□□□□□ -0.71
UBR4-205ENST00000417040 C19orf35Q6ZS72 473 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 STPG2Q8N412 459 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 OR10G8Q8NGN5 311 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 ANAPC16Q96DE5 110 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 OR5AC2Q9NZP5 309 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 LOC389332A0A1B0GUA5 103 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 PMS2P1A4D2B8 440 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 EIF3GO75821 320 aaKnown RBP eCLIP10.64□□□□□ -0.71
UBR4-205ENST00000417040 SPCS3P61009 180 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 SKP2Q13309 424 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 Q6ZS52 159 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 TMEM147Q9BVK8 224 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 SLC45A2Q9UMX9 530 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 OR4C46A6NHA9 309 aa10.64□□□□□ -0.71
UBR4-205ENST00000417040 IL2RAP01589 272 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms