RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 EXOSC4Q9NPD3 245 aaKnown RBP5.25□□□□□ -1.57
USP54-202ENST00000413442 SNTG1Q9NSN8 517 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FKBP14Q9NWM8 211 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 OR6C3Q9NZP0 311 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 ONECUT1Q9UBC0 465 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 PITPNC1Q9UKF7 332 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 BLOC1S6Q9UL45 172 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 LRRC42Q9Y546 428 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 MINOS1-NBL1R4GNA1 71 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 DSCAML1Q8TD84 2053 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 IGKV1-27A0A075B6S5 117 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 TRGV10A0A0A0MS01 117 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 TRBV5-5A0A0J9YX44 114 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 DNAJC9-AS1A6NH13 148 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 VGLL3A8MV65 326 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 OOSP1A8MZH6 123 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 DEGS1O15121 323 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 CDK1P06493 297 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 MELTFP08582 738 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 UBBP0CG47 229 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 FSTP19883 344 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 MYF6P23409 242 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 C21orf33P30042 268 aaPredicted RBP5.24□□□□□ -1.57
USP54-202ENST00000413442 BDKRB2P30411 391 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 ZNF93P35789 620 aaPredicted RBP5.24□□□□□ -1.57
USP54-202ENST00000413442 CEACAM3P40198 252 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 DYNLT3P51808 116 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 PRRX1P54821 245 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 COL10A1Q03692 680 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 RBM39Q14498 530 aaKnown RBP5.24□□□□□ -1.57
USP54-202ENST00000413442 SPHARQ15513 63 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 FAM189A2Q15884 450 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 SMN1Q16637 294 aaKnown RBP5.24□□□□□ -1.57
USP54-202ENST00000413442 MPV17LQ2QL34 196 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 DEFB112Q30KQ8 113 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 TMEM30BQ3MIR4 351 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 Q3ZCU0 254 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 RBM48Q5RL73 367 aaKnown RBP5.24□□□□□ -1.57
USP54-202ENST00000413442 ZNF771Q7L3S4 317 aaPredicted RBP5.24□□□□□ -1.57
USP54-202ENST00000413442 NKAIN3Q8N8D7 197 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 ASCC1Q8N9N2 400 aaKnown RBP5.24□□□□□ -1.57
USP54-202ENST00000413442 OR51A2Q8NGJ7 313 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 OR13C9Q8NGT0 318 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 CNIH3Q8TBE1 160 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 ZNF596Q8TC21 504 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 SLAMF9Q96A28 289 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 ZNF714Q96N38 554 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 GPER1Q99527 375 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 PDCD1LG2Q9BQ51 273 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 UQCC2Q9BRT2 126 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 MND1Q9BWT6 205 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 ANKRD60Q9BZ19 345 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 Q9H521 79 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 DUSP21Q9H596 190 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 OR14J1Q9UGF5 321 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 RAB26Q9ULW5 256 aa5.24□□□□□ -1.57
USP54-202ENST00000413442 A0A0G2JK05 382 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 A6NIN4 97 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 ZNF729A6NN14 1252 aaPredicted RBP5.23□□□□□ -1.57
USP54-202ENST00000413442 E9PI62 339 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 RNASEK-C17orf49H0YIS7 233 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 HOXA3O43365 443 aaPredicted RBP5.23□□□□□ -1.57
USP54-202ENST00000413442 FCN3O75636 299 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 TSPAN9O75954 239 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 BPNT1O95861 308 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 SFTPBP07988 381 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 CD37P11049 281 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 GTF2F2P13984 249 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 PRKACAP17612 351 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 IGFBP3P17936 291 aaPredicted RBP5.23□□□□□ -1.57
USP54-202ENST00000413442 GALP22466 123 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 GABRR1P24046 479 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 P2RX3P56373 397 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 EDDM3BP56851 147 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 ZP1P60852 638 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 TPBGQ13641 420 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 RSU1Q15404 277 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 GRK1Q15835 563 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 OR2G6Q5TZ20 316 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 SLC35E4Q6ICL7 350 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 UNQ9370/PRO34162Q6UXP9 181 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 HEPN1Q6WQI6 88 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 C17orf107Q6ZR85 190 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 C16orf82Q7Z2V1 217 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 ZNF554Q86TJ5 538 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 FAM185AQ8N0U4 392 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 BCL6BQ8N143 479 aaPredicted RBP5.23□□□□□ -1.57
USP54-202ENST00000413442 OSR2Q8N2R0 312 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 C11orf42Q8N5U0 333 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.23□□□□□ -1.57
USP54-202ENST00000413442 BPIFB6Q8NFQ5 453 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 OR51A4Q8NGJ6 313 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 OR52M1Q8NGK5 317 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 SEH1LQ96EE3 360 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 ZNF48Q96MX3 618 aaPredicted RBP5.23□□□□□ -1.57
USP54-202ENST00000413442 CENPOQ9BU64 300 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 C16orf95Q9H693 158 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 RANBP3Q9H6Z4 567 aaPredicted RBP5.23□□□□□ -1.57
USP54-202ENST00000413442 LINC00574Q9H8X3 128 aa5.23□□□□□ -1.57
USP54-202ENST00000413442 ESM1Q9NQ30 184 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms