RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 PTGFRP43088 359 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 OR3A1P47881 315 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 CAV3P56539 151 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 RELBQ01201 579 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 SCN1BQ07699 218 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 KLRD1Q13241 179 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 GPR50Q13585 617 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 EDDM3AQ14507 147 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 ZNF146Q15072 292 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 RSU1Q15404 277 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 NEDD8Q15843 81 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 PIGYQ3MUY2 71 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 KCTD21Q4G0X4 260 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 HSD17B12Q53GQ0 312 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 UBE2UQ5VVX9 321 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 CD276Q5ZPR3 534 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 Q6P435 159 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 GLIPR1L1Q6UWM5 242 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 ASCL4Q6XD76 172 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 BRD3OSQ6XYD6 125 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 TCF23Q7RTU1 214 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 Q8IYB0 196 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 SAXO1Q8IYX7 474 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 Q8N7P7 452 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 C8orf46Q8TAG6 207 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 UPRTQ96BW1 309 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 C1orf147Q96MC9 270 aaPredicted RBP6.35□□□□□ -1.39
CPSF4-202ENST00000412686 WDFY2Q96P53 400 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 GFI1Q99684 422 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 YTHDF1Q9BYJ9 559 aaKnown RBP6.35□□□□□ -1.39
CPSF4-202ENST00000412686 SIRPDQ9H106 197 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 PPA2Q9H2U2 334 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 TCF7L1Q9HCS4 588 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 EXOSC4Q9NPD3 245 aaKnown RBP6.35□□□□□ -1.39
CPSF4-202ENST00000412686 SIRT7Q9NRC8 400 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 ING3Q9NXR8 418 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 ONECUT1Q9UBC0 465 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 ZNF69Q9UC07 566 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 MRPS28Q9Y2Q9 187 aaKnown RBP6.35□□□□□ -1.39
CPSF4-202ENST00000412686 AK6Q9Y3D8 172 aaKnown RBP6.35□□□□□ -1.39
CPSF4-202ENST00000412686 LRRC42Q9Y546 428 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 WNK2Q9Y3S1 2297 aa6.35□□□□□ -1.39
CPSF4-202ENST00000412686 A0A1W2PRD5 423 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 A0A1W2PRF3 423 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 A0A1W2PRM7 423 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 SMIM30A4D0T7 59 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 POM121CA8CG34 1229 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 TOX4O94842 621 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 ECDO95905 644 aaPredicted RBP6.34□□□□□ -1.39
CPSF4-202ENST00000412686 CHRM2P08172 466 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 SRMP19623 302 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 EPHA1P21709 976 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 GABRR1P24046 479 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 CALRP27797 417 aaKnown RBP6.34□□□□□ -1.39
CPSF4-202ENST00000412686 MTNR1BP49286 362 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 EDDM3BP56851 147 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 ATXN7L3Q14CW9 347 aaPredicted RBP6.34□□□□□ -1.39
CPSF4-202ENST00000412686 GRK1Q15835 563 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 SLC22A6Q4U2R8 563 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 SPIN3Q5JUX0 258 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 METTL11BQ5VVY1 283 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 TMEM200BQ69YZ2 307 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 AWAT2Q6E213 333 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 ELP2Q6IA86 826 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 OR10K2Q6IF99 312 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 FIP1L1Q6UN15 594 aaKnown RBP6.34□□□□□ -1.39
CPSF4-202ENST00000412686 VMO1Q7Z5L0 202 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 OR8H2Q8N162 312 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 PNKDQ8N490 385 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 PNLDC1Q8NA58 520 aaKnown RBP6.34□□□□□ -1.39
CPSF4-202ENST00000412686 NANPQ8TBE9 248 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 LHX4Q969G2 390 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 FAM46BQ96A09 425 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 CPNE2Q96FN4 548 aaPredicted RBP6.34□□□□□ -1.39
CPSF4-202ENST00000412686 SNX22Q96L94 193 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 ZNF48Q96MX3 618 aaPredicted RBP6.34□□□□□ -1.39
CPSF4-202ENST00000412686 SLC6A7Q99884 636 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 FAM234AQ9H0X4 552 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 BANF2Q9H503 90 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 NDUFB11Q9NX14 153 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 MTORP42345 2549 aa6.34□□□□□ -1.39
CPSF4-202ENST00000412686 DSCAML1Q8TD84 2053 aa6.34□□□□□ -1.4
CPSF4-202ENST00000412686 NSD1Q96L73 2696 aaPredicted RBP6.33□□□□□ -1.4
CPSF4-202ENST00000412686 CUBNO60494 3623 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 TRAV24A0A0B4J272 114 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 A0A0G2JK05 382 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 CENPVL3A0A0U1RRI6 287 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 SLC33A1O00400 549 aaPredicted RBP6.33□□□□□ -1.4
CPSF4-202ENST00000412686 CCRL2O00421 344 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 GEMIN2O14893 280 aaKnown RBP6.33□□□□□ -1.4
CPSF4-202ENST00000412686 DEGS1O15121 323 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 LIPFP07098 398 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 LMO1P25800 156 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 CLDN12P56749 244 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 OR10A3P58181 314 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 RPL31P62899 125 aaKnown RBP6.33□□□□□ -1.4
CPSF4-202ENST00000412686 AESQ08117 197 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 TRAM1Q15629 374 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 TAF9Q16594 264 aa6.33□□□□□ -1.4
CPSF4-202ENST00000412686 SYT6Q5T7P8 510 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms