RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 OR10X1Q8NGY0 326 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR6K3Q8NGY3 331 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR51A7Q8NH64 312 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMEM234Q8WY98 164 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 TCEAL3Q969E4 200 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 ELSPBP1Q96BH3 223 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 DCPSQ96C86 337 aaKnown RBP3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 FAM19A4Q96LR4 140 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 HDHD3Q9BSH5 251 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 DCUN1D5Q9BTE7 237 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 GGACTQ9BVM4 153 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 EDA2RQ9HAV5 297 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 RGS18Q9NS28 235 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 BABAM2Q9NXR7 383 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 TRMT112Q9UI30 125 aaKnown RBP3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 KLF12Q9Y4X4 402 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR51B4Q9Y5P0 310 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZNF646O15015 1829 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 CEP152O94986 1710 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 ARHGAP21Q5T5U3 1957 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 SOGA1O94964 1423 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 LRP4O75096 1905 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 IGKV1-8A0A0C4DH67 115 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 FAM92AA1XBS5 289 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 A6NDX4 124 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 INS-IGF2F8WCM5 200 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 J3QLI3 93 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 K7EP13 123 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 UBDO15205 165 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 CHP2O43745 196 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 FADS1O60427 444 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 RAD1O60671 282 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 MPZL1O95297 269 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 TTC4O95801 387 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 IGF2P01344 180 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 IFNGP01579 166 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 TCN2P20062 427 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 SLC6A1P30531 599 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 ADORA1P30542 326 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 GNRHRP30968 328 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 PRLHRP49683 370 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 SYNJ2BPP57105 145 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 SNAP25P60880 206 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 UBE2NP61088 152 aaKnown RBP3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 RPL31P62899 125 aaKnown RBP3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 ST3GAL4Q11206 333 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 MLLT11Q13015 90 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 SRSF6Q13247 344 aaKnown RBP3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 MED21Q13503 144 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 GINS1Q14691 196 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 TRAM1Q15629 374 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 MPPED2Q15777 294 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 SLC36A2Q495M3 483 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 ACSM3Q53FZ2 586 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 AVPI1Q5T686 147 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 TRIQKQ629K1 86 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 ELP2Q6IA86 826 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 LPCAT3Q6P1A2 487 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 DNM1P34Q6PK57 102 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 DHRS4L2Q6PKH6 230 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 SPNS3Q6ZMD2 512 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 NT5DC3Q86UY8 548 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 TRAPPC5Q8IUR0 188 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR6V1Q8N148 313 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 STX19Q8N4C7 294 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 C15orf56Q8N910 161 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 Q8N9W7 124 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 ST6GALNAC3Q8NDV1 305 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 STOML3Q8TAV4 291 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 ABHD3Q8WU67 409 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 PHF10Q8WUB8 498 aaKnown RBP3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 RNF138Q8WVD3 245 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 YIPF6Q96EC8 236 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 L3HYPDHQ96EM0 354 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 CPNE2Q96FN4 548 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZFP3Q96NJ6 502 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 QKIQ96PU8 341 aaKnown RBP eCLIP3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 SAMD10Q9BYL1 202 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 RPP21Q9H633 154 aaKnown RBP3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 ZNF442Q9H7R0 627 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 TMEM138Q9NPI0 162 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR12D3Q9UGF7 316 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 VPREB3Q9UKI3 123 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 OR52A1Q9UKL2 312 aa3.26□□□□□ -1.89
HMGB1P13-201ENST00000406019 THOC2Q8NI27 1593 aaKnown RBP3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 ATRXP46100 2492 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 A0A1W2PRG6 482 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 F5H768 121 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 LINC01619G3V211 115 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 DNASE2O00115 360 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 CDC40O60508 579 aaKnown RBP eCLIP3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 SCO1O75880 301 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 GABARAPO95166 117 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 BCHEP06276 602 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 RHOCP08134 193 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 MYL9P24844 172 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 CD70P32970 193 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 ARL2P36404 184 aa3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 RPL5P46777 297 aaKnown RBP3.25□□□□□ -1.89
HMGB1P13-201ENST00000406019 RPS10P46783 165 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms