RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NXT1Q9UKK6 140 aaKnown RBP20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 B3GALT1Q9Y5Z6 326 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 WSB1Q9Y6I7 421 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 SMCO3A2RU48 225 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 ICAM4Q14773 271 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 ZNF385CQ66K41 422 aaPredicted RBP20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 DPPA2Q7Z7J5 298 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 HIST1H2BLQ99880 126 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 SLC25A31Q9H0C2 315 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 ANXA10Q9UJ72 324 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 PIGLQ9Y2B2 252 aa20.88■□□□□ 0.93
CSNK1E-203ENST00000396832 PHOX2AO14813 284 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 SCAF4O95104 1147 aaKnown RBP20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 TIAF1O95411 115 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 PAX1P15863 534 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 CSNK1A1P48729 337 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 CLDN17P56750 224 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 FAAP24Q9BTP7 215 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 ZNF160Q9HCG1 818 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 MSTNO14793 375 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 OR2J2O76002 312 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 ZNF728P0DKX0 622 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 PNLIPP16233 465 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 TAF9Q16594 264 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 PLPPR5Q32ZL2 321 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 SLC22A25Q6T423 547 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 DOK3Q7L591 496 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 TSTD1Q8NFU3 115 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 OR2AE1Q8NHA4 323 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 C18orf12Q96KH6 178 aa20.87■□□□□ 0.93
CSNK1E-203ENST00000396832 TCAPO15273 167 aa20.86■□□□□ 0.93
CSNK1E-203ENST00000396832 GNMTQ14749 295 aa20.86■□□□□ 0.93
CSNK1E-203ENST00000396832 OR5R1Q8NH85 324 aa20.86■□□□□ 0.93
CSNK1E-203ENST00000396832 NEU1Q99519 415 aa20.86■□□□□ 0.93
CSNK1E-203ENST00000396832 GPR173Q9NS66 373 aa20.86■□□□□ 0.93
CSNK1E-203ENST00000396832 IGHV1OR15-9A0A0B4J2B8 117 aa20.86■□□□□ 0.93
CSNK1E-203ENST00000396832 FAM24AA6NFZ4 105 aa20.86■□□□□ 0.93
CSNK1E-203ENST00000396832 LIAT1Q6ZQX7 453 aa20.86■□□□□ 0.93
CSNK1E-203ENST00000396832 FBXL14Q8N1E6 418 aa20.86■□□□□ 0.93
CSNK1E-203ENST00000396832 OR5L1Q8NGL2 311 aa20.86■□□□□ 0.93
CSNK1E-203ENST00000396832 CCDC85CA6NKD9 419 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 ZNF850A8MQ14 1090 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 BOD1Q96IK1 185 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 HSF4Q9ULV5 492 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 WDFY4Q6ZS81 3184 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 C2CD4DB7Z1M9 353 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 MKRN2OSH3BPM6 223 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 HSPB1P04792 205 aaKnown RBP20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 SLC35E3Q7Z769 313 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 OR14L1PQ8NHC6 308 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 TM2D1Q9BX74 207 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 A0A087WZY1 265 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 G3V3Y1 287 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 SNRPCP09234 159 aaKnown RBP20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 PGA5P0DJD9 388 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 OMGP23515 440 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 ZNF266Q14584 549 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 ARL6IP1Q15041 203 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 PHYHD1Q5SRE7 291 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 OR8G5Q8NG78 346 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 SNX22Q96L94 193 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 TCFL5Q9UL49 500 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 TP53TG5Q9Y2B4 290 aa20.85■□□□□ 0.93
CSNK1E-203ENST00000396832 FAM230AA0A1W2PPH8 454 aa20.84■□□□□ 0.93
CSNK1E-203ENST00000396832 C9J4A7 227 aa20.84■□□□□ 0.93
CSNK1E-203ENST00000396832 TNRC18O15417 2968 aaPredicted RBP20.84■□□□□ 0.93
CSNK1E-203ENST00000396832 OR2C3Q8N628 320 aa20.84■□□□□ 0.93
CSNK1E-203ENST00000396832 LRTM2Q8N967 370 aa20.84■□□□□ 0.93
CSNK1E-203ENST00000396832 CCDC187A0A096LP49 1063 aa20.84■□□□□ 0.93
CSNK1E-203ENST00000396832 CCDC163A0A0D9SF12 145 aa20.84■□□□□ 0.93
CSNK1E-203ENST00000396832 CCL1P22362 96 aa20.84■□□□□ 0.93
CSNK1E-203ENST00000396832 PPA1Q15181 289 aa20.84■□□□□ 0.93
CSNK1E-203ENST00000396832 RTL6Q6ICC9 239 aa20.84■□□□□ 0.93
CSNK1E-203ENST00000396832 ANKRD37Q7Z713 158 aa20.84■□□□□ 0.93
CSNK1E-203ENST00000396832 NPIPB13A6NJU9 1138 aa20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 A8MWP6 167 aa20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 NPIPB4C9JG80 1138 aa20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 CA11O75493 328 aa20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 ALDH3B1P43353 468 aa20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 HLA-DRB3P79483 266 aa20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 OR8G1Q15617 311 aa20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 ZNF506Q5JVG8 444 aa20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 C1orf87Q8N0U7 546 aa20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 OR11L1Q8NGX0 322 aa20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 MSI2Q96DH6 328 aaKnown RBP20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 WASF3Q9UPY6 502 aa20.83■□□□□ 0.93
CSNK1E-203ENST00000396832 C10orf142B7Z368 130 aa20.83■□□□□ 0.92
CSNK1E-203ENST00000396832 LMO7DNF2Z398 122 aa20.83■□□□□ 0.92
CSNK1E-203ENST00000396832 SLC25A47Q6Q0C1 308 aa20.83■□□□□ 0.92
CSNK1E-203ENST00000396832 P4HA3Q7Z4N8 544 aa20.83■□□□□ 0.92
CSNK1E-203ENST00000396832 CPEB2Q7Z5Q1 589 aaKnown RBP20.83■□□□□ 0.92
CSNK1E-203ENST00000396832 LGI3Q8N145 548 aa20.83■□□□□ 0.92
CSNK1E-203ENST00000396832 ZNF501Q96CX3 271 aaPredicted RBP20.83■□□□□ 0.92
CSNK1E-203ENST00000396832 A0A1W2PNV4 684 aa20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 SUMF1Q8NBK3 374 aa20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 PLPP5Q8NEB5 264 aa20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 RBM24Q9BX46 236 aaKnown RBP20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 C8orf33Q9H7E9 229 aaPredicted RBP20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 SLC2A9Q9NRM0 540 aa20.82■□□□□ 0.92
CSNK1E-203ENST00000396832 FAM86C1Q9NVL1 165 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms