RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 LIAT1Q6ZQX7 453 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 CYGBQ8WWM9 190 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 SPACA5Q96QH8 159 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 CHCHD3Q9NX63 227 aaKnown RBP11.17□□□□□ -0.62
CXCL12-205ENST00000395794 IL36RNQ9UBH0 155 aa11.17□□□□□ -0.62
CXCL12-205ENST00000395794 TBL2Q9Y4P3 447 aaKnown RBP11.17□□□□□ -0.62
CXCL12-205ENST00000395794 TRGV10A0A0A0MS01 117 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 E9PI62 339 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 PSPNO60542 156 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 ALX3O95076 343 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 CD2P06729 351 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 ZNF44P15621 663 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 RAB3AP20336 220 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 DCKP27707 260 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 ERP29P30040 261 aaKnown RBP11.16□□□□□ -0.62
CXCL12-205ENST00000395794 P2RX3P56373 397 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 KISS1Q15726 138 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 LRRC36Q1X8D7 754 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 CCDC58Q4VC31 144 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 RPL22L1Q6P5R6 122 aaKnown RBP11.16□□□□□ -0.62
CXCL12-205ENST00000395794 C11orf88Q6PI97 169 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 PARP16Q8N5Y8 322 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 TPRX1Q8N7U7 411 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 CHST4Q8NCG5 386 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 SETD9Q8NE22 299 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 OR4S1Q8NGB4 309 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 OR11H6Q8NGC7 330 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 OR52N4Q8NGI2 321 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 APH1BQ8WW43 257 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 MALSU1Q96EH3 234 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 GPER1Q99527 375 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 PDCD1LG2Q9BQ51 273 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 NPFFR1Q9GZQ6 430 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 GAL3ST2Q9H3Q3 398 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 FGF20Q9NP95 211 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-205ENST00000395794 UBE2J1Q9Y385 318 aaPredicted RBP11.16□□□□□ -0.62
CXCL12-205ENST00000395794 SESN1Q9Y6P5 492 aa11.16□□□□□ -0.62
CXCL12-205ENST00000395794 DEGS1O15121 323 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 OR2H2O95918 312 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 FAM189A2Q15884 450 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 SSX2Q16385 188 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 SMN1Q16637 294 aaKnown RBP11.15□□□□□ -0.62
CXCL12-205ENST00000395794 PLA1AQ53H76 456 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 OR52W1Q6IF63 320 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 SATL1Q86VE3 508 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 PACRGLQ8N7B6 248 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 OR2T6Q8NHC8 308 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 RPS4Y2Q8TD47 263 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 GPR148Q8TDV2 347 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 AJUBAQ96IF1 538 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 JAM3Q9BX67 310 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 FBLN5Q9UBX5 448 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 PITPNC1Q9UKF7 332 aa11.15□□□□□ -0.62
CXCL12-205ENST00000395794 IGKV1-12A0A0C4DH73 117 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 FAM90A8PA6NJQ4 464 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 VGLL3A8MV65 326 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 WBP4O75554 376 aaKnown RBP11.14□□□□□ -0.63
CXCL12-205ENST00000395794 IGKV1D-12P01611 117 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 LIMS3P0CW19 117 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 LIMS4P0CW20 117 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 PAX6P26367 422 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 OR3A1P47881 315 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 SOX2P48431 317 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 MTNR1BP49286 362 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 GTF2A1P52655 376 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-205ENST00000395794 PPP3R1P63098 170 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 MINOS1Q5TGZ0 78 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 ZNF691Q5VV52 312 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 ZNF626Q68DY1 528 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 LHFPL4Q7Z7J7 247 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 DHRSXQ8N5I4 330 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 NDNFQ8TB73 568 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 NKX3-1Q99801 234 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-205ENST00000395794 ZNF649Q9BS31 505 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 CDCA4Q9BXL8 241 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 CLEC7AQ9BXN2 247 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 FAM192AQ9GZU8 254 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 TMEM133Q9H2Q1 129 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 RANBP3Q9H6Z4 567 aaPredicted RBP11.14□□□□□ -0.63
CXCL12-205ENST00000395794 EXOSC1Q9Y3B2 195 aaKnown RBP11.14□□□□□ -0.63
CXCL12-205ENST00000395794 MINOS1-NBL1R4GNA1 71 aa11.14□□□□□ -0.63
CXCL12-205ENST00000395794 A0A0G2JK05 382 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 ODF3BA8MYP8 253 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 F2RL2O00254 374 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 LMO1P25800 156 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 KIR2DS4P43632 304 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 ETV1P50549 477 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 AESQ08117 197 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 IL18R1Q13478 541 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 RCN1Q15293 331 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 RSU1Q15404 277 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 KRBOX4Q5JUW0 171 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 ASPHD2Q6ICH7 369 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 Q6ZTK2 550 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 TCF23Q7RTU1 214 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 PXT1Q8NFP0 134 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 CNIH3Q8TBE1 160 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 TNFAIP8L1Q8WVP5 186 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 TMEM80Q96HE8 168 aa11.13□□□□□ -0.63
CXCL12-205ENST00000395794 NR1H4Q96RI1 486 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms