RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 FZR1Q9UM11 496 aa16.91■□□□□ 0.3
PDLIM5-205ENST00000380180 CHD3Q12873 2000 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-205ENST00000380180 PI3P19957 117 aa16.9■□□□□ 0.3
PDLIM5-205ENST00000380180 TAS2R31P59538 309 aa16.9■□□□□ 0.3
PDLIM5-205ENST00000380180 NAAAQ02083 359 aa16.9■□□□□ 0.3
PDLIM5-205ENST00000380180 OR8G1Q15617 311 aa16.9■□□□□ 0.3
PDLIM5-205ENST00000380180 MPPED2Q15777 294 aa16.9■□□□□ 0.3
PDLIM5-205ENST00000380180 TMEM128Q5BJH2 165 aa16.9■□□□□ 0.3
PDLIM5-205ENST00000380180 ZNF2Q9BSG1 426 aaPredicted RBP16.9■□□□□ 0.3
PDLIM5-205ENST00000380180 RTBDNQ9BSG5 229 aaPredicted RBP16.9■□□□□ 0.3
PDLIM5-205ENST00000380180 OPN4Q9UHM6 478 aa16.9■□□□□ 0.3
PDLIM5-205ENST00000380180 TLN1Q9Y490 2541 aaKnown RBP16.9■□□□□ 0.3
PDLIM5-205ENST00000380180 A0A0G2JNJ9 132 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 F5H5P2 479 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 TPD52L2O43399 206 aaKnown RBP16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 OR5H8P0DN80 308 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 DHODHQ02127 395 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 FAM27E3Q08E93 113 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 ZNF154Q13106 437 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 ZNF718Q3SXZ3 478 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 ZNF660Q6AZW8 331 aaPredicted RBP16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 SLC22A25Q6T423 547 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 MITD1Q8WV92 249 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 TMEM230Q96A57 120 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 SLA2Q9H6Q3 261 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 NECAP2Q9NVZ3 263 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 Q9UFV3 132 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 ZNF835Q9Y2P0 537 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 IGHV3-64DA0A0J9YX35 117 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 EEF1E1-BLOC1S5C9J1V9 151 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 MLNRO43193 412 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 KITLGP21583 273 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 LY6G6FQ5SQ64 297 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 LIN54Q6MZP7 749 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 LINC00596Q86U02 117 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 CASTOR1Q8WTX7 329 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 MUCL1Q96DR8 90 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 ZNF286AQ9HBT8 521 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 SH3BGRL2Q9UJC5 107 aa16.89■□□□□ 0.29
PDLIM5-205ENST00000380180 M0R1B8 84 aa16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 HSPB6O14558 160 aa16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 CDIPTO14735 213 aa16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 TIMM8AO60220 97 aaPredicted RBP16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 DUS4LO95620 317 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 GRPP07492 148 aa16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 GLRA1P23415 457 aa16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 GCH1P30793 250 aa16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 LGALSLQ3ZCW2 172 aaPredicted RBP16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 MBNL2Q5VZF2 373 aaKnown RBP16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 PHB2Q99623 299 aa16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 GON7Q9BXV9 100 aa16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 LIME1Q9H400 295 aa16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 CHMP1AQ9HD42 196 aaPredicted RBP16.88■□□□□ 0.29
PDLIM5-205ENST00000380180 MCRIP1C9JLW8 97 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 IL13RA2Q14627 380 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 SURF2Q15527 256 aaPredicted RBP16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 DHRS11Q6UWP2 260 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 NCCRP1Q6ZVX7 275 aaPredicted RBP16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 C1orf174Q8IYL3 243 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 TMPRSS13Q9BYE2 586 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 WDR13Q9H1Z4 485 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 RHOFQ9HBH0 211 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 POLDIP2Q9Y2S7 368 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 ZNF205O95201 554 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 ERVK11-1P61568 191 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 Q6ZR03 302 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 SUMF2Q8NBJ7 301 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 NEK7Q8TDX7 302 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 PIGMQ9H3S5 423 aa16.87■□□□□ 0.29
PDLIM5-205ENST00000380180 TMEM210A6NLX4 147 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 HS3ST1O14792 307 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 ATP6V1G1O75348 118 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 NAPSAO96009 420 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 PGAM2P15259 253 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 PPP3CBP16298 524 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 C22orf34Q6ZV56 151 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 OR5M8Q8NGP6 311 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 SPACA1Q9HBV2 294 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 DECR2Q9NUI1 292 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 C3orf36Q3SXR2 165 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 KCTD9Q7L273 389 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 MRGPRGQ86SM5 289 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 RDH5Q92781 318 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 MSL2Q9HCI7 577 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 SLC23A1Q9UHI7 598 aa16.86■□□□□ 0.29
PDLIM5-205ENST00000380180 ICE1Q9Y2F5 2266 aa16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 TRAV24A0A0B4J272 114 aa16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 CCSO14618 274 aa16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 SFT2D2O95562 160 aa16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 PGA5P0DJD9 388 aa16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 HLA-GP17693 338 aa16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 ECI1P42126 302 aa16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 SUPT4H1P63272 117 aaKnown RBP16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 RGS7BPQ6MZT1 257 aaPredicted RBP16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 Q8IYB0 196 aa16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 ASB13Q8WXK3 278 aa16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 NRIP2Q9BQI9 281 aa16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 Q9N2K0 584 aa16.85■□□□□ 0.29
PDLIM5-205ENST00000380180 PLSCR5A0PG75 271 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms