RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 PPYP01298 95 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 Q8IYB0 196 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 HDHD3Q9BSH5 251 aaPredicted RBP15.3■□□□□ 0.04
PTPRU-202ENST00000373779 TMEM74BQ9NUR3 256 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 V9GYS6 101 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 G3V3Q6 166 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 KRASP01116 189 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 SULT1A2P50226 295 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 ARTNQ5T4W7 220 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 UBAC2Q8NBM4 344 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 ZNRF4Q8WWF5 429 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 CD74P04233 296 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 MPGP29372 298 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 UBE2G2P60604 165 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 ATP5SQ99766 215 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 SOX7Q9BT81 388 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 SF3B5Q9BWJ5 86 aaKnown RBP15.3■□□□□ 0.04
PTPRU-202ENST00000373779 CST2P09228 141 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 EFNB1P98172 346 aa15.3■□□□□ 0.04
PTPRU-202ENST00000373779 TMEM30CPA0ZSE6 113 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 PNLIPP16233 465 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 TEX30Q5JUR7 227 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 FAM173AQ9BQD7 235 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 IGLV3-21P80748 117 aaPredicted RBP15.29■□□□□ 0.04
PTPRU-202ENST00000373779 EGR4Q05215 589 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 CORO2AQ92828 525 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 A0A1W2PP11 408 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 A0A1W2PPE2 198 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 CEACAM6P40199 344 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 TMEM241Q24JQ0 296 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 PLPPR5Q32ZL2 321 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 ADIPOR1Q96A54 375 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 NPTNQ9Y639 398 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 LOC105371267A0A1B0GV96 52 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 PIGYQ3MUY2 71 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 ZNF66Q6ZN08 573 aa15.29■□□□□ 0.04
PTPRU-202ENST00000373779 SLC22A20A6NK97 555 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 J3QRE1 110 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 EPHA8P29322 1005 aaPredicted RBP15.28■□□□□ 0.04
PTPRU-202ENST00000373779 ZNF92Q03936 586 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 CDS2O95674 445 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 NPBWR1P48145 328 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 CCL11P51671 97 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 MLF1P58340 268 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 TRA2AQ13595 282 aaKnown RBP eCLIP15.28■□□□□ 0.04
PTPRU-202ENST00000373779 ZNF439Q8NDP4 499 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 G6PC2Q9NQR9 355 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 PIPOXQ9P0Z9 390 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 ASCC3Q8N3C0 2202 aaKnown RBP15.28■□□□□ 0.04
PTPRU-202ENST00000373779 GALR1P47211 349 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 EDARADDQ8WWZ3 215 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 TAAR3PQ9P1P4 343 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 SEC14L6B5MCN3 397 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 AQP7O14520 342 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 ZNF737O75373 536 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 CD8AP01732 235 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 GAPDHP04406 335 aaKnown RBP15.28■□□□□ 0.04
PTPRU-202ENST00000373779 VDAC1P21796 283 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 MDH2P40926 338 aaKnown RBP15.28■□□□□ 0.04
PTPRU-202ENST00000373779 FFAR4Q5NUL3 377 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 CRIPAKQ8N1N5 446 aa15.28■□□□□ 0.04
PTPRU-202ENST00000373779 ZNF331Q9NQX6 463 aaPredicted RBP15.28■□□□□ 0.04
PTPRU-202ENST00000373779 NKX2-6A6NCS4 301 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 TRDCB7Z8K6 153 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 CHST1O43916 411 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 CCL2P13500 99 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 CA6P23280 308 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 FGF8P55075 233 aaPredicted RBP15.27■□□□□ 0.04
PTPRU-202ENST00000373779 PPP1CBP62140 327 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 TMEM211Q6ICI0 200 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 GAPTQ8N292 157 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 DYRK2Q92630 601 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 UCN2Q96RP3 112 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 FAM206AQ9NX38 181 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 WBP1LQ9NX94 342 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 NKX6-3A6NJ46 265 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 LPAR6P43657 344 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 PNRC1Q12796 327 aaPredicted RBP15.27■□□□□ 0.04
PTPRU-202ENST00000373779 IP6K3Q96PC2 410 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 DYNLRB1Q9NP97 96 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 SLC2A8Q9NY64 477 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 FAM3AP98173 230 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 ZNF154Q13106 437 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 LDLRAD3Q86YD5 345 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 TET1Q8NFU7 2136 aa15.27■□□□□ 0.04
PTPRU-202ENST00000373779 DEDDO75618 318 aa15.27■□□□□ 0.03
PTPRU-202ENST00000373779 ACER2Q5QJU3 275 aa15.27■□□□□ 0.03
PTPRU-202ENST00000373779 C20orf202A1L168 122 aa15.27■□□□□ 0.03
PTPRU-202ENST00000373779 MS4A18H0YCH9 400 aa15.27■□□□□ 0.03
PTPRU-202ENST00000373779 ENSAO43768 121 aaKnown RBP15.27■□□□□ 0.03
PTPRU-202ENST00000373779 DLK1P80370 383 aa15.27■□□□□ 0.03
PTPRU-202ENST00000373779 MS4A18Q3C1V0 323 aa15.27■□□□□ 0.03
PTPRU-202ENST00000373779 TRIB1Q96RU8 372 aa15.27■□□□□ 0.03
PTPRU-202ENST00000373779 TXN2Q99757 166 aa15.27■□□□□ 0.03
PTPRU-202ENST00000373779 CASP6P55212 293 aa15.26■□□□□ 0.03
PTPRU-202ENST00000373779 FOXL2P58012 376 aa15.26■□□□□ 0.03
PTPRU-202ENST00000373779 ZNF658BQ4V348 819 aaPredicted RBP15.26■□□□□ 0.03
PTPRU-202ENST00000373779 AQP10Q96PS8 301 aa15.26■□□□□ 0.03
PTPRU-202ENST00000373779 S1PR3Q99500 378 aa15.26■□□□□ 0.03
PTPRU-202ENST00000373779 ZDHHC11Q9H8X9 412 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms