RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 C3orf80F5H4A9 247 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 SYNGR1O43759 233 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 DUSP1P28562 367 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 GLRX5Q86SX6 157 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 MOB3AQ96BX8 217 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 SLC5A7Q9GZV3 580 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 KCNIP3Q9Y2W7 256 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 SPEF1Q9Y4P9 236 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 TTC28Q96AY4 2481 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 CACNA1HO95180 2353 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 HSPB6O14558 160 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 IFNA21P01568 189 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 APLNRP35414 380 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 GLP1RP43220 463 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 FGF12P61328 243 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 NAAAQ02083 359 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 OR5T2Q8NGG2 359 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 BCL2L2Q92843 193 aaPredicted RBP16.07■□□□□ 0.16
USP49-202ENST00000373010 DNTTIP1Q9H147 329 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 DNAJB11Q9UBS4 358 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 PCDHB10Q9UN67 800 aa16.07■□□□□ 0.16
USP49-202ENST00000373010 NKX2-8O15522 239 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 CLN3Q13286 438 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 IGFBP7Q16270 282 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 FBXW9Q5XUX1 488 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 OR2A2Q6IF42 318 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 MDP1Q86V88 176 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 SAXO1Q8IYX7 474 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 ZNF488Q96MN9 340 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 LSM5Q9Y4Y9 91 aaKnown RBP16.06■□□□□ 0.16
USP49-202ENST00000373010 ESPL1Q14674 2120 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 TRAPPC2LH3BP13 241 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 FGF16O43320 207 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 SCGB1D2O95969 90 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 HKR1P10072 659 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 PMELP40967 661 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 SPATA46Q5T0L3 261 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 DEFB124Q8NES8 71 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 HIST1H2AAQ96QV6 131 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 TUBD1Q9UJT1 453 aa16.06■□□□□ 0.16
USP49-202ENST00000373010 FAM90A10PA6NDY2 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A18PA6NE21 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A16PA6NEW6 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A20PA6NIJ5 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A8PA6NJQ4 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A7PA6NKC0 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A22PA8MWA6 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A12PA8MX19 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A5PA8MXJ8 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A23PA8MXZ1 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A15PP0C7V4 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A13PP0C7W8 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A14PP0C7W9 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FAM90A24PP0C7X0 464 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 HERV-K104P61576 105 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 HAGHLQ6PII5 290 aaPredicted RBP16.05■□□□□ 0.16
USP49-202ENST00000373010 LYZL2Q7Z4W2 148 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 SPERTQ8NA61 448 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 TMEM178AQ8NBL3 297 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 OR5A2Q8NGI9 324 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 GALNT14Q96FL9 552 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 ZC4H2Q9NQZ6 224 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 SPAARA0A1B0GVQ0 90 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 BTN1A1Q13410 526 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 BPIFCQ8NFQ6 507 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 OR5P3Q8WZ94 311 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 ZDHHC11Q9H8X9 412 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 FRYQ5TBA9 3013 aa16.05■□□□□ 0.16
USP49-202ENST00000373010 PRRC2CQ9Y520 2896 aaKnown RBP16.04■□□□□ 0.16
USP49-202ENST00000373010 PPYP01298 95 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 IL32P24001 234 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 TNFSF10P50591 281 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 NOVA1P51513 510 aaKnown RBP16.04■□□□□ 0.16
USP49-202ENST00000373010 TSC22D1Q15714 1073 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 OR2T2Q6IF00 324 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 PIP4P1Q86T03 277 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 MKXQ8IYA7 352 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 A0A1W2PR80 420 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 ANKRD30BLA7E2S9 258 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 LRP3O75074 770 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 DEDDO75618 318 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 PRKACAP17612 351 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 CCL11P51671 97 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 RPL7L1Q6DKI1 246 aaKnown RBP16.04■□□□□ 0.16
USP49-202ENST00000373010 TFAP2EQ6VUC0 442 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 MYPOPQ86VE0 399 aaPredicted RBP16.04■□□□□ 0.16
USP49-202ENST00000373010 SUMF1Q8NBK3 374 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 NEK7Q8TDX7 302 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 GLYATL2Q8WU03 294 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 POM121Q96HA1 1249 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 RSRP1Q9BUV0 290 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 PARD6AQ9NPB6 346 aa16.04■□□□□ 0.16
USP49-202ENST00000373010 WISP2O76076 250 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 APOC3P02656 99 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 SCTP09683 121 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 RPL12P30050 165 aaKnown RBP16.03■□□□□ 0.16
USP49-202ENST00000373010 UCP3P55916 312 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 LIAT1Q6ZQX7 453 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 MARC2Q969Z3 335 aa16.03■□□□□ 0.16
USP49-202ENST00000373010 MSI2Q96DH6 328 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms