RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 VAX1Q5SQQ9 334 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 ATPAF1Q5TC12 328 aaPredicted RBP8.91□□□□□ -0.98
COL5A1-202ENST00000371820 TRAPPC6BQ86SZ2 158 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 NAA40Q86UY6 237 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 TMEM123Q8N131 208 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 OR52B4Q8NGK2 314 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 TERB2Q8NHR7 220 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 ST8SIA2Q92186 375 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 GCDHQ92947 438 aaPredicted RBP8.91□□□□□ -0.98
COL5A1-202ENST00000371820 OCSTAMPQ9BR26 566 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 MRPL13Q9BYD1 178 aaKnown RBP8.91□□□□□ -0.98
COL5A1-202ENST00000371820 ULBP2Q9BZM5 246 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 CST11Q9H112 138 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 RAB18Q9NP72 206 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 PCDHB16Q9NRJ7 776 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 ZFP57Q9NU63 452 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 FAM206AQ9NX38 181 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 RASL12Q9NYN1 266 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 A0A096LPE4 126 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 IGHV1-18A0A0C4DH31 117 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 A0A1W2PPZ6 126 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 C9orf170A2RU37 121 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 CEACAM18A8MTB9 384 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 TMEM14DPA8MWL7 114 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 ATP6V1G2-DDX39BF2Z307 99 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 RAB27BO00194 218 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 IGKV3-15P01624 115 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 HLA-AP01891 365 aaKnown RBP8.9□□□□□ -0.98
COL5A1-202ENST00000371820 ZNF250P15622 560 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 CBR1P16152 277 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 CCL1P22362 96 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 CSNK1A1P48729 337 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 TAS2R46P59540 309 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 GUCA2AQ02747 115 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 ECH1Q13011 328 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 RAB35Q15286 201 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 GFOD2Q3B7J2 385 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 SCGB2B2Q4G0G5 96 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 CARD17Q5XLA6 110 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 ZNF660Q6AZW8 331 aaPredicted RBP8.9□□□□□ -0.98
COL5A1-202ENST00000371820 FAAP20Q6NZ36 180 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 MOB3CQ70IA8 216 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 TMED4Q7Z7H5 227 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 PEG10Q86TG7 708 aaKnown RBP8.9□□□□□ -0.98
COL5A1-202ENST00000371820 ANGPTL5Q86XS5 388 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 C20orf196Q8IYI0 205 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 PP6455Q8WZ26 134 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 C11orf40Q8WZ69 217 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 MARC2Q969Z3 335 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 WDR89Q96FK6 387 aaPredicted RBP8.9□□□□□ -0.98
COL5A1-202ENST00000371820 S100A13Q99584 98 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 ARPC5LQ9BPX5 153 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 EMC6Q9BV81 110 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 CNTD2Q9H8S5 307 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 MED29Q9NX70 200 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 DNAJB11Q9UBS4 358 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 ANAPC10Q9UM13 185 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 ATRQ13535 2644 aa8.9□□□□□ -0.98
COL5A1-202ENST00000371820 SONP18583 2426 aaKnown RBP8.89□□□□□ -0.99
COL5A1-202ENST00000371820 P2RY10O00398 339 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 KDM4BO94953 1096 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 IGLV1-44P01699 117 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 IGHV4-39P01824 125 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 TTRP02766 147 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 CECR9P0C854 216 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 PTHLHP12272 177 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 TPT1P13693 172 aaKnown RBP8.89□□□□□ -0.99
COL5A1-202ENST00000371820 HLA-DOBP13765 273 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 THBS4P35443 961 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 IDH3GP51553 393 aaPredicted RBP8.89□□□□□ -0.99
COL5A1-202ENST00000371820 BIDP55957 195 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 MFGE8Q08431 387 aaPredicted RBP8.89□□□□□ -0.99
COL5A1-202ENST00000371820 MELKQ14680 651 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 C11orf71Q6IPW1 123 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 SLC25A47Q6Q0C1 308 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 CLEC2AQ6UVW9 174 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 NHLRC1Q6VVB1 395 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 LSRQ86X29 649 aaPredicted RBP8.89□□□□□ -0.99
COL5A1-202ENST00000371820 ZNF101Q8IZC7 436 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 NOXO1Q8NFA2 376 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 GJC3Q8NFK1 279 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 OR4K15Q8NH41 348 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 RNF141Q8WVD5 230 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 FOXB1Q99853 325 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 SLC6A7Q99884 636 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 TINAGL1Q9GZM7 467 aaPredicted RBP8.89□□□□□ -0.99
COL5A1-202ENST00000371820 NELFAQ9H3P2 528 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 C12orf4Q9NQ89 552 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 TAS2R3Q9NYW6 316 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 CGGBP1Q9UFW8 167 aaPredicted RBP8.89□□□□□ -0.99
COL5A1-202ENST00000371820 ZNF391Q9UJN7 358 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 POLR1DQ9Y2S0 133 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 COL6A5A8TX70 2615 aa8.89□□□□□ -0.99
COL5A1-202ENST00000371820 TRBV6-7A0A0A0MS04 114 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 PIGBOS1A0A0B4J2F0 54 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 A0A0U1RQV5 110 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 RNF222A6NCQ9 220 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 DHRS7CA6NNS2 312 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 SERPINE3A8MV23 424 aa8.88□□□□□ -0.99
COL5A1-202ENST00000371820 MPTX1A8MV57 137 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms