RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 GTF3AQ92664 365 aaKnown RBP12.06□□□□□ -0.48
USF1-202ENST00000368020 WBP1Q96G27 269 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 RIMS4Q9H426 269 aaPredicted RBP12.06□□□□□ -0.48
USF1-202ENST00000368020 DNAJB11Q9UBS4 358 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 LHX6Q9UPM6 363 aa12.06□□□□□ -0.48
USF1-202ENST00000368020 TEX13DA0A0J9YY54 714 aaPredicted RBP12.05□□□□□ -0.48
USF1-202ENST00000368020 KNG1P01042 644 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 GLAP06280 429 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 HAAOP46952 286 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 NAAAQ02083 359 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 C3AR1Q16581 482 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 TBR1Q16650 682 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 ANKRD55Q3KP44 614 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 RGS7BPQ6MZT1 257 aaPredicted RBP12.05□□□□□ -0.48
USF1-202ENST00000368020 PRSS54Q6PEW0 395 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 FAM185AQ8N0U4 392 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 CCDC71LQ8N9Z2 235 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 SLC30A7Q8NEW0 376 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 STOML3Q8TAV4 291 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 RBPMSQ93062 196 aaKnown RBP12.05□□□□□ -0.48
USF1-202ENST00000368020 GALNT14Q96FL9 552 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 HDHD3Q9BSH5 251 aaPredicted RBP12.05□□□□□ -0.48
USF1-202ENST00000368020 SUCNR1Q9BXA5 334 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 C12orf49Q9H741 205 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 ZFP57Q9NU63 452 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 PRSS50Q9UI38 385 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 STARD10Q9Y365 291 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 CSAG2Q9Y5P2 127 aa12.05□□□□□ -0.48
USF1-202ENST00000368020 ZFHX4Q86UP3 3567 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 IGKV1D-8A0A087WSZ0 117 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 AQP7O14520 342 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 PI3P19957 117 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 GPM6AP51674 278 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 FOXG1P55316 489 aaPredicted RBP12.04□□□□□ -0.48
USF1-202ENST00000368020 GNG3P63215 75 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 EIF5AP63241 154 aaKnown RBP12.04□□□□□ -0.48
USF1-202ENST00000368020 SLC22A25Q6T423 547 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 ZADH2Q8N4Q0 377 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 HPSE2Q8WWQ2 592 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 DCUN1D4Q92564 292 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 ZNF471Q9BX82 626 aaPredicted RBP12.04□□□□□ -0.48
USF1-202ENST00000368020 PKIBQ9C010 78 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 DNTTIP1Q9H147 329 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 RCC2Q9P258 522 aaKnown RBP12.04□□□□□ -0.48
USF1-202ENST00000368020 CLCF1Q9UBD9 225 aa12.04□□□□□ -0.48
USF1-202ENST00000368020 PIGBOS1A0A0B4J2F0 54 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 KIR2DS1A0A191URI9 304 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 ZNF503-AS2A6NEH8 195 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 ZNF732B4DXR9 585 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 CTXN2P0C2S0 81 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 TPT1P13693 172 aaKnown RBP12.03□□□□□ -0.48
USF1-202ENST00000368020 OPRM1P35372 400 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 KIR2DS4P43632 304 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 PRSS12P56730 875 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 UBE2NP61088 152 aaKnown RBP12.03□□□□□ -0.48
USF1-202ENST00000368020 HERV-K104P61576 105 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 SRPXP78539 464 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 IL13RA2Q14627 380 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 KIR2DS1Q14954 304 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 RNFT1Q5M7Z0 435 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 UNQ6126/PRO20091Q6UXV3 157 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 EIF4E3Q8N5X7 224 aaKnown RBP12.03□□□□□ -0.48
USF1-202ENST00000368020 OR5P3Q8WZ94 311 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 MOB3AQ96BX8 217 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 SARAFQ96BY9 339 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 SDHAF2Q9NX18 166 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 RASL12Q9NYN1 266 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 TUBD1Q9UJT1 453 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 NUP50Q9UKX7 468 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 MED12LQ86YW9 2145 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 MFSD2BA6NFX1 497 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 KRBOX1C9JBD0 128 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 F5H0A9 414 aaPredicted RBP12.03□□□□□ -0.48
USF1-202ENST00000368020 TUBG1P23258 451 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 PTGER4P35408 488 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 PIGPP57054 158 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 IL24Q13007 206 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 SMCO1Q147U7 214 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 OR2A2Q6IF42 318 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 FBXW12Q6X9E4 464 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 HSD17B13Q7Z5P4 300 aaPredicted RBP12.03□□□□□ -0.48
USF1-202ENST00000368020 Q8IYB0 196 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 LRTM2Q8N967 370 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 POC1AQ8NBT0 407 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 C1orf162Q8NEQ5 155 aaPredicted RBP12.03□□□□□ -0.48
USF1-202ENST00000368020 EXTL1Q92935 676 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 BOD1Q96IK1 185 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 AQP10Q96PS8 301 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 TUBG2Q9NRH3 451 aa12.03□□□□□ -0.48
USF1-202ENST00000368020 TLN1Q9Y490 2541 aaKnown RBP12.02□□□□□ -0.48
USF1-202ENST00000368020 SPTA1P02549 2419 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 F8VVB4 439 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 F8VWA3 439 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 TAAR5O14804 337 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 ADAP1O75689 374 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 DIRAS3O95661 229 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 RLN2P04090 185 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 CCL2P13500 99 aa12.02□□□□□ -0.49
USF1-202ENST00000368020 SELEP16581 610 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms