RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 GABARAPL3Q9BY60 117 aa12.58□□□□□ -0.4
DDX55-202ENST00000354291 PLEKHA1Q9HB21 404 aa12.58□□□□□ -0.4
DDX55-202ENST00000354291 OAZ3Q9UMX2 235 aa12.58□□□□□ -0.4
DDX55-202ENST00000354291 SLC7A11Q9UPY5 501 aa12.58□□□□□ -0.4
DDX55-202ENST00000354291 A6NIN4 97 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 C17orf98A8MV24 154 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 SYT7O43581 403 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 SNRNP70P08621 437 aaKnown RBP12.57□□□□□ -0.4
DDX55-202ENST00000354291 POLR2IP36954 125 aaKnown RBP12.57□□□□□ -0.4
DDX55-202ENST00000354291 CDC42P60953 191 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 IL24Q13007 206 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 C16orf82Q7Z2V1 217 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 CALHM1Q8IU99 346 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 KLHL30-AS1Q8NEE0 82 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 OR10H4Q8NGA5 316 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 PKIBQ9C010 78 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 RIBC2Q9H4K1 309 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 HES4Q9HCC6 221 aa12.57□□□□□ -0.4
DDX55-202ENST00000354291 GATBO75879 557 aaKnown RBP12.56□□□□□ -0.4
DDX55-202ENST00000354291 SERPINA3P01011 423 aa12.56□□□□□ -0.4
DDX55-202ENST00000354291 GP2P55259 537 aaKnown RBP12.56□□□□□ -0.4
DDX55-202ENST00000354291 DLX6P56179 175 aa12.56□□□□□ -0.4
DDX55-202ENST00000354291 ERVK11-1P61568 191 aa12.56□□□□□ -0.4
DDX55-202ENST00000354291 ODF4Q2M2E3 257 aa12.56□□□□□ -0.4
DDX55-202ENST00000354291 ANGPTL5Q86XS5 388 aa12.56□□□□□ -0.4
DDX55-202ENST00000354291 TRUB1Q8WWH5 349 aaKnown RBP12.56□□□□□ -0.4
DDX55-202ENST00000354291 C10orf35Q96D05 121 aa12.56□□□□□ -0.4
DDX55-202ENST00000354291 SLC25A33Q9BSK2 321 aa12.56□□□□□ -0.4
DDX55-202ENST00000354291 LIN7BQ9HAP6 207 aa12.56□□□□□ -0.4
DDX55-202ENST00000354291 OR14J1Q9UGF5 321 aa12.56□□□□□ -0.4
DDX55-202ENST00000354291 SMAD5-AS1Q9Y6J3 95 aa12.56□□□□□ -0.4
DDX55-202ENST00000354291 FAM230AA0A1W2PPH8 454 aa12.55□□□□□ -0.4
DDX55-202ENST00000354291 APOL3O95236 402 aa12.55□□□□□ -0.4
DDX55-202ENST00000354291 LY86O95711 162 aa12.55□□□□□ -0.4
DDX55-202ENST00000354291 TK1P04183 234 aa12.55□□□□□ -0.4
DDX55-202ENST00000354291 FUT6P51993 359 aa12.55□□□□□ -0.4
DDX55-202ENST00000354291 C9orf66Q5T8R8 295 aa12.55□□□□□ -0.4
DDX55-202ENST00000354291 MINOS1Q5TGZ0 78 aa12.55□□□□□ -0.4
DDX55-202ENST00000354291 OVCH2Q7RTZ1 564 aa12.55□□□□□ -0.4
DDX55-202ENST00000354291 TRMT10AQ8TBZ6 339 aaKnown RBP12.55□□□□□ -0.4
DDX55-202ENST00000354291 EME1Q96AY2 570 aa12.55□□□□□ -0.4
DDX55-202ENST00000354291 ORC6Q9Y5N6 252 aa12.55□□□□□ -0.4
DDX55-202ENST00000354291 MINOS1-NBL1R4GNA1 71 aa12.55□□□□□ -0.4
DDX55-202ENST00000354291 SAC3D1A6NKF1 404 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 K7N7A8 449 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 UBCP0CG48 685 aaKnown RBP12.54□□□□□ -0.4
DDX55-202ENST00000354291 ZNF728P0DKX0 622 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 IGHV1-8P0DP01 117 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 ACTA2P62736 377 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 ACTG2P63267 376 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 ACTC1P68032 377 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 ACTA1P68133 377 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 UBE2V2Q15819 145 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 FAM220AQ7Z4H9 259 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 KCTD20Q7Z5Y7 419 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 CITED4Q96RK1 184 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 CHST5Q9GZS9 411 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 ZMAT4Q9H898 229 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 ZFP57Q9NU63 452 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 IMPAD1Q9NX62 359 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 GNG8Q9UK08 70 aa12.54□□□□□ -0.4
DDX55-202ENST00000354291 CCL24O00175 119 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 AMY1AP04745 511 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 AMY2AP04746 511 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 BRS3P32247 399 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 IL18R1Q13478 541 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 SLC25A30Q5SVS4 291 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 BATF2Q8N1L9 274 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 PRSS35Q8N3Z0 413 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 ASCC1Q8N9N2 400 aaKnown RBP12.53□□□□□ -0.4
DDX55-202ENST00000354291 PYDC1Q8WXC3 89 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 PP6455Q8WZ26 134 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 BORCS8Q96FH0 119 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 RAX2Q96IS3 184 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 CEP19Q96LK0 163 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 RBM14Q96PK6 669 aaKnown RBP12.53□□□□□ -0.4
DDX55-202ENST00000354291 MTCH1Q9NZJ7 389 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 SCOCQ9UIL1 159 aa12.53□□□□□ -0.4
DDX55-202ENST00000354291 ZNF256Q9Y2P7 627 aaPredicted RBP12.53□□□□□ -0.4
DDX55-202ENST00000354291 PLECQ15149 4684 aaKnown RBP12.52□□□□□ -0.4
DDX55-202ENST00000354291 LOC107986453A0A1B0GWG9 222 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 SEC14L6B5MCN3 397 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 H3BSH0 61 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 OR2F2O95006 317 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 ALPLP05186 524 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 SLC6A1P30531 599 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 OR3A4PP47883 348 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 ISL1P61371 349 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 ZNF85Q03923 595 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 TP53I3Q53FA7 332 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 TMEM244Q5VVB8 128 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 MEDAGQ5VYS4 303 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 EGFL6Q8IUX8 553 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 ZNF695Q8IW36 515 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 Q8IYB0 196 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 DNAAF1Q8NEP3 725 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 OR5M8Q8NGP6 311 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 HRASLS5Q96KN8 279 aa12.52□□□□□ -0.41
DDX55-202ENST00000354291 NOL4LQ96MY1 436 aaPredicted RBP12.52□□□□□ -0.41
DDX55-202ENST00000354291 SEBOXQ9HB31 216 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms