RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CA6P23280 308 aa15.94■□□□□ 0.14
HOXA9-201ENST00000343483 OPRM1P35372 400 aa15.94■□□□□ 0.14
HOXA9-201ENST00000343483 BEX5Q5H9J7 111 aa15.94■□□□□ 0.14
HOXA9-201ENST00000343483 REG4Q9BYZ8 158 aa15.94■□□□□ 0.14
HOXA9-201ENST00000343483 MED9Q9NWA0 146 aa15.94■□□□□ 0.14
HOXA9-201ENST00000343483 TMA7Q9Y2S6 64 aaKnown RBP15.94■□□□□ 0.14
HOXA9-201ENST00000343483 FAM221AA4D161 298 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 RNF222A6NCQ9 220 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 BCL2L11O43521 198 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 TNFSF13O75888 250 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 AGFG2O95081 481 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 PPP1CBP62140 327 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 PLEKHN1Q494U1 663 aaPredicted RBP15.93■□□□□ 0.14
HOXA9-201ENST00000343483 SPACA3Q8IXA5 215 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 OR2J1Q9GZK6 312 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 OPN3Q9H1Y3 402 aaPredicted RBP15.93■□□□□ 0.14
HOXA9-201ENST00000343483 PLSCR4Q9NRQ2 329 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 MBD2Q9UBB5 411 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 PFDN2Q9UHV9 154 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 PROCRQ9UNN8 238 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 MPC1Q9Y5U8 109 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 MFSD2BA6NFX1 497 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 F8VVB4 439 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 F8VWA3 439 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 MKRN2OSH3BPM6 223 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 CRHP06850 196 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 FCGR3AP08637 254 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 GLRA1P23415 457 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 ERVS71-1P61550 626 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 HAGHLQ6PII5 290 aaPredicted RBP15.93■□□□□ 0.14
HOXA9-201ENST00000343483 PDZD9Q8IXQ8 264 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 SAXO1Q8IYX7 474 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 ZNF610Q8N9Z0 462 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 NMES1Q9C002 83 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 ZNF442Q9H7R0 627 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 CHMP1AQ9HD42 196 aaPredicted RBP15.93■□□□□ 0.14
HOXA9-201ENST00000343483 PRR13Q9NZ81 148 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 ANXA10Q9UJ72 324 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 EDARQ9UNE0 448 aa15.93■□□□□ 0.14
HOXA9-201ENST00000343483 A0A0B4J2A0 478 aa15.92■□□□□ 0.14
HOXA9-201ENST00000343483 J3QW42 95 aa15.92■□□□□ 0.14
HOXA9-201ENST00000343483 PSMB6P28072 239 aa15.92■□□□□ 0.14
HOXA9-201ENST00000343483 SUPT4H1P63272 117 aaKnown RBP15.92■□□□□ 0.14
HOXA9-201ENST00000343483 CYCSP99999 105 aaKnown RBP15.92■□□□□ 0.14
HOXA9-201ENST00000343483 SEM1Q6ZVN7 128 aa15.92■□□□□ 0.14
HOXA9-201ENST00000343483 CXorf67Q86X51 503 aaPredicted RBP15.92■□□□□ 0.14
HOXA9-201ENST00000343483 MKXQ8IYA7 352 aa15.92■□□□□ 0.14
HOXA9-201ENST00000343483 INO80EQ8NBZ0 244 aaPredicted RBP15.92■□□□□ 0.14
HOXA9-201ENST00000343483 STARD4Q96DR4 205 aa15.92■□□□□ 0.14
HOXA9-201ENST00000343483 WDR13Q9H1Z4 485 aa15.92■□□□□ 0.14
HOXA9-201ENST00000343483 MTCH1Q9NZJ7 389 aa15.92■□□□□ 0.14
HOXA9-201ENST00000343483 SHPKQ9UHJ6 478 aa15.92■□□□□ 0.14
HOXA9-201ENST00000343483 TRAPPC2LH3BP13 241 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 SYNGR1O43759 233 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 CRYABP02511 175 aaKnown RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 PGAM2P15259 253 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 FUT3P21217 361 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 DTYMKP23919 212 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 LUMP51884 338 aaPredicted RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 DAZAP2Q15038 168 aaPredicted RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 ANKRD55Q3KP44 614 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 FBXW12Q6X9E4 464 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 C1orf162Q8NEQ5 155 aaPredicted RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 HS3ST6Q96QI5 342 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 DMRTA2Q96SC8 542 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 RAB18Q9NP72 206 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 SMG1Q96Q15 3661 aaKnown RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 MBD3L4A6NDZ8 208 aaPredicted RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 MBD3L3A6NE82 208 aaPredicted RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 MBD3L5A6NJ08 208 aaPredicted RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 OR5B21A6NL26 309 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 WDR1O75083 606 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 ADAP1O75689 374 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 HOXB1P14653 301 aaPredicted RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 FGF12P61328 243 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 GNG3P63215 75 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 SURF2Q15527 256 aaPredicted RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 TMEM200AQ86VY9 491 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 WDR31Q8NA23 367 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 RELL2Q8NC24 303 aaPredicted RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 Q8NFD4 153 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 OR1S1Q8NH92 325 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 MBD3L2Q8NHZ7 208 aaPredicted RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 MICU1Q9BPX6 476 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 ZNF471Q9BX82 626 aaPredicted RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 NARFLQ9H6Q4 476 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 C14orf166Q9Y224 244 aaKnown RBP15.91■□□□□ 0.14
HOXA9-201ENST00000343483 SESN1Q9Y6P5 492 aa15.91■□□□□ 0.14
HOXA9-201ENST00000343483 KMT2BQ9UMN6 2715 aaPredicted RBP15.9■□□□□ 0.14
HOXA9-201ENST00000343483 TMEM8BA6NDV4 472 aa15.9■□□□□ 0.14
HOXA9-201ENST00000343483 RRP8O43159 456 aaKnown RBP15.9■□□□□ 0.14
HOXA9-201ENST00000343483 CBR1P16152 277 aa15.9■□□□□ 0.14
HOXA9-201ENST00000343483 UCP2P55851 309 aa15.9■□□□□ 0.14
HOXA9-201ENST00000343483 IGFBP7Q16270 282 aa15.9■□□□□ 0.14
HOXA9-201ENST00000343483 ELP2Q6IA86 826 aa15.9■□□□□ 0.14
HOXA9-201ENST00000343483 ZNF573Q86YE8 665 aa15.9■□□□□ 0.14
HOXA9-201ENST00000343483 OR1J1Q8NGS3 322 aa15.9■□□□□ 0.14
HOXA9-201ENST00000343483 ZNF2Q9BSG1 426 aaPredicted RBP15.9■□□□□ 0.14
HOXA9-201ENST00000343483 SLC25A32Q9H2D1 315 aa15.9■□□□□ 0.14
HOXA9-201ENST00000343483 C12orf4Q9NQ89 552 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms