RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SLC37A1P57057 533 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 TGIF2LYQ8IUE0 185 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 SYS1Q8N2H4 156 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 C5orf17Q8NAS9 161 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 TMEM255BQ8WV15 326 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 CHST6Q9GZX3 395 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 CTNSO60931 367 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 MEF2CQ06413 473 aaPredicted RBP5.54□□□□□ -1.52
VCAN-203ENST00000343200 FMODQ06828 376 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 ZNF415Q09FC8 603 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 MGAT2Q10469 447 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 HFEQ30201 348 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 FBLN7Q53RD9 439 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 OR2C3Q8N628 320 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 CLDN23Q96B33 292 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 TMEM208Q9BTX3 173 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 FITM1A5D6W6 292 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 ACOT8O14734 319 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 P2RY1P47900 373 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 EDDM3BP56851 147 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 FUT7Q11130 342 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 MYBPHQ13203 477 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 SNAI3Q3KNW1 292 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 PLA1AQ53H76 456 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 ZNF542PQ5EBM4 170 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 MAVSQ7Z434 540 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 PFN4Q8NHR9 129 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 MUCL1Q96DR8 90 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 VN1R1Q9GZP7 353 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 SLC2A4RGQ9NR83 387 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 PLSCR4Q9NRQ2 329 aa5.54□□□□□ -1.52
VCAN-203ENST00000343200 MC5RP33032 325 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 C2orf27AQ580R0 203 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 C6orf132Q5T0Z8 1188 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 ARL14EPQ8N8R7 260 aaPredicted RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 TNFRSF14Q92956 283 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 GPR88Q9GZN0 384 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 MEGF9Q9H1U4 602 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 LRP6O75581 1613 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 TRDCB7Z8K6 153 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 SFTPCP11686 197 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 ZXDAP98168 799 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 GAGE2BQ13066 116 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 SIX1Q15475 284 aaPredicted RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 MICBQ29980 383 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 GAGE2EQ4V326 116 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 CD99L2Q8TCZ2 262 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 KCNS1Q96KK3 526 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 GAGE2DQ9UEU5 116 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 POLQO75417 2590 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 SPTBN4Q9H254 2564 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 TMEM8BA6NDV4 472 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 DPRXA6NFQ7 191 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 SDCBPO00560 298 aaPredicted RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 KIR2DS3Q14952 304 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 IGFBP7Q16270 282 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 TMEM95Q3KNT9 176 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 XKR7Q5GH72 579 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 ZNF880Q6PDB4 577 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 PAQR6Q6TCH4 344 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 SNRNP40Q96DI7 357 aaKnown RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 TECRQ9NZ01 308 aaKnown RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 HSFX1Q9UBD0 423 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 BOKQ9UMX3 212 aaPredicted RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 NEU3Q9UQ49 428 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 BCL9LQ86UU0 1499 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 TRBV23-1A0A0A0MS06 115 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 GOSR1O95249 250 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 PRSS56P0CW18 603 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 LGALS3P17931 250 aaKnown RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 FCARP24071 287 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 EIF3IQ13347 325 aaKnown RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 VHLLQ6RSH7 139 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 Q8IYB0 196 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 DERL3Q96Q80 235 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 GHITMQ9H3K2 345 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 DDTLA6NHG4 134 aaPredicted RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 GPR25O00155 361 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 FURINP09958 794 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 ZNF250P15622 560 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 HOXC5Q00444 222 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 PTOV1Q86YD1 416 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 GBGT1Q8N5D6 347 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 LSM10Q969L4 123 aaKnown RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 PRR14Q9BWN1 585 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 MTFP1Q9UDX5 166 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 ST3GAL6Q9Y274 331 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 SH2D7A6NKC9 451 aaPredicted RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 MRPL33O75394 65 aaKnown RBP5.53□□□□□ -1.52
VCAN-203ENST00000343200 C1orf105O95561 183 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 TBX18O95935 607 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 ONECUT2O95948 504 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 LGALS4P56470 323 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 NAAAQ02083 359 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 ERV3-1Q14264 604 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 GAMTQ14353 236 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 ABHD17BQ5VST6 288 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 RANBP10Q6VN20 620 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 OR1B1Q8NGR6 318 aa5.53□□□□□ -1.52
VCAN-203ENST00000343200 R4GMQ9 66 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms