RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 A0A0U1RQV5 110 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 LRP5LA4QPB2 252 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 NDUFA2O43678 99 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 SCGB1D1O95968 90 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 SRSF4Q08170 494 aaKnown RBP11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 PIGYQ3MUY2 71 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 DNM1P46Q6ZS02 220 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF611Q8N823 705 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 TMEM230Q96A57 120 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 CALHM2Q9HA72 323 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 RALGAPA1Q6GYQ0 2036 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 FCGR3AP08637 254 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 DANCRP0C864 163 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 PPP1CCP36873 323 aaKnown RBP11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 CLDN15P56746 228 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 CLEC12BQ2HXU8 276 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF528Q3MIS6 628 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 ABHD17BQ5VST6 288 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 NCR3LG1Q68D85 454 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 OR56B2PQ8NGI1 322 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 NANOS1Q8WY41 292 aaKnown RBP11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 SMDT1Q9H4I9 107 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 ZNF391Q9UJN7 358 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 LAMP3Q9UQV4 416 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 NXPH1P58417 271 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 TBC1D26Q86UD7 250 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 ADPRHL1Q8NDY3 354 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 OR2M3Q8NG83 312 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 OR11L1Q8NGX0 322 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 CDH20Q9HBT6 801 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 ENY2Q9NPA8 101 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 METTL1Q9UBP6 276 aaKnown RBP11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 PPP1R3CQ9UQK1 317 aa11.15□□□□□ -0.62
DNMT3A-202ENST00000321117 TRBV6-7A0A0A0MS04 114 aa11.15□□□□□ -0.63
DNMT3A-202ENST00000321117 TRAF3IP2O43734 574 aaPredicted RBP11.15□□□□□ -0.63
DNMT3A-202ENST00000321117 CBR3O75828 277 aa11.15□□□□□ -0.63
DNMT3A-202ENST00000321117 HEXAP06865 529 aa11.15□□□□□ -0.63
DNMT3A-202ENST00000321117 FBLN5Q9UBX5 448 aa11.15□□□□□ -0.63
DNMT3A-202ENST00000321117 BOKQ9UMX3 212 aaPredicted RBP11.15□□□□□ -0.63
DNMT3A-202ENST00000321117 IGKV3D-11A0A0A0MRZ8 115 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 A0A1W2PNV4 684 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 LINC00587B1AMM8 73 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 CATR1Q13166 79 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 TMEM164Q5U3C3 297 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 C1QL2Q7Z5L3 287 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 HPSE2Q8WWQ2 592 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 TECTBQ96PL2 329 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 PRO1933Q9H354 126 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 TMEM100Q9NV29 134 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 KIAA1456Q9P272 454 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 DEGS1O15121 323 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 CYTIPO60759 359 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 SERPINA7P05543 415 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 ACAA1P09110 424 aaPredicted RBP11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 VDAC1P21796 283 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 TMEM267Q0VDI3 215 aaPredicted RBP11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 CYTL1Q9NRR1 136 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 A0A1W2PPQ1 181 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 UBE2V2Q15819 145 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 TMEM41BQ5BJD5 291 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 ZDHHC23Q8IYP9 409 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 ZNF385AQ96PM9 386 aaKnown RBP11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 UCN2Q96RP3 112 aa11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 RIMS4Q9H426 269 aaPredicted RBP11.14□□□□□ -0.63
DNMT3A-202ENST00000321117 A0A096LPE4 126 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 A0A1W2PPZ6 126 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 CHST1O43916 411 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 ADCYAP1P18509 176 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 UBE2NP61088 152 aaKnown RBP11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 IL24Q13007 206 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 BTNL8Q6UX41 500 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 ZNF383Q8NA42 475 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 SH3BGRL3Q9H299 93 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 GSN-AS1Q9NRJ2 163 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 C5orf49A4QMS7 147 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 LY86O95711 162 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 RAB40CQ96S21 281 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 ESRP2Q9H6T0 727 aaKnown RBP11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 ZNF732B4DXR9 585 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 GPM6AP51674 278 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 ZNF154Q13106 437 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 CYB561D1Q8N8Q1 229 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 OR4F5Q8NH21 305 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 OR4F4Q96R69 305 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 BARX1Q9HBU1 254 aaPredicted RBP11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 SIRT7Q9NRC8 400 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 AHCTF1Q8WYP5 2266 aa11.13□□□□□ -0.63
DNMT3A-202ENST00000321117 TRBV23-1A0A0A0MS06 115 aa11.12□□□□□ -0.63
DNMT3A-202ENST00000321117 SRFP11831 508 aa11.12□□□□□ -0.63
DNMT3A-202ENST00000321117 HOXB1P14653 301 aaPredicted RBP11.12□□□□□ -0.63
DNMT3A-202ENST00000321117 CFPP27918 469 aa11.12□□□□□ -0.63
DNMT3A-202ENST00000321117 ARF1P84077 181 aaKnown RBP11.12□□□□□ -0.63
DNMT3A-202ENST00000321117 APCDD1LQ8NCL9 501 aa11.12□□□□□ -0.63
DNMT3A-202ENST00000321117 CADM4Q8NFZ8 388 aa11.12□□□□□ -0.63
DNMT3A-202ENST00000321117 ZNF501Q96CX3 271 aaPredicted RBP11.12□□□□□ -0.63
DNMT3A-202ENST00000321117 CCDC74BQ96LY2 380 aa11.12□□□□□ -0.63
DNMT3A-202ENST00000321117 COL4A6Q14031 1691 aa11.12□□□□□ -0.63
DNMT3A-202ENST00000321117 ELOA3CA0A087WX78 387 aaPredicted RBP11.12□□□□□ -0.63
DNMT3A-202ENST00000321117 TRDCB7Z8K6 153 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms