RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 POC1AQ8NBT0 407 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 OR52M1Q8NGK5 317 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 OR2AJ1Q8NGZ0 328 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 POM121L2Q96KW2 1035 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 VSTM2LQ96N03 204 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 OR2V2Q96R30 315 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 HCFC1R1Q9NWW0 138 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 FLRT3Q9NZU0 649 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 ABI3Q9P2A4 366 aa5.82□□□□□ -1.48
ZNF540-201ENST00000316433 A0A1W2PRU2 124 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 FITM1A5D6W6 292 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 MAP1LC3B2A6NCE7 125 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 B4DGG1 531 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 K7ESM1 405 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 K7N7A8 449 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 B3GALT2O43825 422 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 NTN1O95631 604 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 MT-CO2P00403 227 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 MT-ATP6P00846 226 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 PFN1P07737 140 aaKnown RBP5.81□□□□□ -1.48
ZNF540-201ENST00000316433 CD1BP29016 333 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 TAS2R31P59538 309 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 ZP4Q12836 540 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 EXOSC7Q15024 291 aaKnown RBP5.81□□□□□ -1.48
ZNF540-201ENST00000316433 SPATA45Q537H7 98 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 TMEM41BQ5BJD5 291 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 TCEAL5Q5H9L2 206 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF506Q5JVG8 444 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 C9orf50Q5SZB4 431 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 MRPL2Q5T653 305 aaKnown RBP5.81□□□□□ -1.48
ZNF540-201ENST00000316433 MDGA2Q7Z553 956 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 TMEM256Q8N2U0 113 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 IL22RA1Q8N6P7 574 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 DTWD2Q8NBA8 298 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 OR8G5Q8NG78 346 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 ASB10Q8WXI3 467 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 KTI12Q96EK9 354 aaPredicted RBP5.81□□□□□ -1.48
ZNF540-201ENST00000316433 OR10C1Q96KK4 312 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 DCBLD2Q96PD2 775 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 MAP1LC3BQ9GZQ8 125 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 SRA1Q9HD15 236 aaKnown RBP5.81□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF586Q9NXT0 402 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 CDC42EP3Q9UKI2 254 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 CCL26Q9Y258 94 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 MRPS16Q9Y3D3 137 aaKnown RBP5.81□□□□□ -1.48
ZNF540-201ENST00000316433 SPACA6W5XKT8 324 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 TRAV34A0A0B4J273 112 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 CPSF4LA6NMK7 179 aaKnown RBP5.81□□□□□ -1.48
ZNF540-201ENST00000316433 GNB3P16520 340 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 CDKN1AP38936 164 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 GABRA2P47869 451 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF92Q03936 586 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 SPEM2Q0P670 501 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 FZD2Q14332 565 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 FAM71F2Q6NXP2 309 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 VASH2Q86V25 355 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 OR51D1Q8NGF3 324 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 FGF13Q92913 245 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 KLHL13Q9P2N7 655 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 PILRBQ9UKJ0 227 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 PPP1R3CQ9UQK1 317 aa5.81□□□□□ -1.48
ZNF540-201ENST00000316433 ODAMA1E959 279 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF891A8MT65 544 aaPredicted RBP5.8□□□□□ -1.48
ZNF540-201ENST00000316433 TRAPPC2LH3BP13 241 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 ERI3O43414 337 aaKnown RBP5.8□□□□□ -1.48
ZNF540-201ENST00000316433 TIAF1O95411 115 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 TIMP1P01033 207 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 CD55P08174 381 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 ZNF708P17019 499 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 GABRA3P34903 492 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 PBX2P40425 430 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 P2RY1P47900 373 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 FOXL2P58012 376 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 CKS1BP61024 79 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 SUMO1P63165 101 aaKnown RBP5.8□□□□□ -1.48
ZNF540-201ENST00000316433 IL15RAQ13261 267 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 PLPPR5Q32ZL2 321 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 TMEM182Q6ZP80 229 aaPredicted RBP5.8□□□□□ -1.48
ZNF540-201ENST00000316433 COX15Q7KZN9 410 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 ERASQ7Z444 233 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 ATG4DQ86TL0 474 aaPredicted RBP5.8□□□□□ -1.48
ZNF540-201ENST00000316433 UBALD2Q8IYN6 164 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 PTPMT1Q8WUK0 201 aaPredicted RBP5.8□□□□□ -1.48
ZNF540-201ENST00000316433 SPSB1Q96BD6 273 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 SLAMF6Q96DU3 332 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 PRAP1Q96NZ9 151 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 SH3BGRL3Q9H299 93 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 TMEM38BQ9NVV0 291 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 CGGBP1Q9UFW8 167 aaPredicted RBP5.8□□□□□ -1.48
ZNF540-201ENST00000316433 MRPS28Q9Y2Q9 187 aaKnown RBP5.8□□□□□ -1.48
ZNF540-201ENST00000316433 EML5Q05BV3 1969 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 A0A1B0GWA3 101 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 NUPR1O60356 82 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 MMP9P14780 707 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 TCN2P20062 427 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 DRD1P21728 446 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 ECI1P42126 302 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 TPPP2P59282 170 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 SRPXP78539 464 aa5.8□□□□□ -1.48
ZNF540-201ENST00000316433 ZFP36L1Q07352 338 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms