RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 GPX4P36969 197 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 UQCRFS1P47985 274 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 IFITM2Q01629 132 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 HIST1H2BAQ96A08 127 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 FOXN4Q96NZ1 517 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TMEFF2Q9UIK5 374 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 SOCS6O14544 535 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 COX6CP09669 75 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 SYPL1Q16563 259 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TMEM236Q5W0B7 351 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 MMP28Q9H239 520 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TMEM262E9PQX1 116 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 CYB5R3P00387 301 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 LGALS7P47929 136 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 OLIG2Q13516 323 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 ABCA7Q8IZY2 2146 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 OR2V1Q8NHB1 315 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 NEURL2Q9BR09 285 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 IRF3Q14653 427 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 RPS26P11Q5JNZ5 115 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 FAM78AQ5JUQ0 283 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 OR5M10Q6IEU7 315 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 OR2A1Q8NGT9 310 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 ACKR4Q9NPB9 350 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 A0A1W2PPQ1 181 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 ZNF705FA8MVS1 300 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 ZNF705DP0CH99 300 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 TMEM176BQ3YBM2 270 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 SFRP4Q6FHJ7 346 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 KCNMB2Q9Y691 235 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 A0A1B0GTI1 187 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 HPRT1P00492 218 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 GUCA2AQ02747 115 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 FAM57BQ71RH2 274 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TGIF2LYQ8IUE0 185 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TOMM40LQ969M1 308 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 CHST2Q9Y4C5 530 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 LSM5Q9Y4Y9 91 aaKnown RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 A0A1W2PPK0 400 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 ZNF791Q3KP31 576 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 CYHR1Q6ZMK1 362 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 LMF1Q96S06 567 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 NAA60Q9H7X0 242 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 NIT2Q9NQR4 276 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TRAV27A0A087WT01 109 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 MPTX1A8MV57 137 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 RER1O15258 196 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 CHST1O43916 411 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 MPGP29372 298 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 PIGCQ92535 297 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 LHX4Q969G2 390 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 FEZF1A0PJY2 475 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 FITM1A5D6W6 292 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 PEX11BO96011 259 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 GPNMBQ14956 572 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 ETFDHQ16134 617 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 KISS1RQ969F8 398 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 GCM1Q9NP62 436 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 B9D1Q9UPM9 204 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 C1QL4Q86Z23 238 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 RBM45Q8IUH3 476 aaKnown RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 OR13C5Q8NGS8 318 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 C2CD4CQ8TF44 421 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 C14orf79Q96F83 325 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 OR51M1Q9H341 326 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 LAMTOR2Q9Y2Q5 125 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 B3GALT1Q9Y5Z6 326 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 LINC01553A4QN01 128 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 GCM2O75603 506 aaPredicted RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 SP1P08047 785 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 AREGP15514 252 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 PAX5Q02548 391 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 ZNF146Q15072 292 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 TEX37Q96LM6 180 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 NTN4Q9HB63 628 aa3.57□□□□□ -1.84
USH2A-201ENST00000307340 CFAP20Q9Y6A4 193 aaKnown RBP3.57□□□□□ -1.84
USH2A-201ENST00000307340 MFSD2BA6NFX1 497 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 GALR1P47211 349 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 C3orf36Q3SXR2 165 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 SHEQ5VZ18 495 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 D2HGDHQ8N465 521 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR13C9Q8NGT0 318 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 MACROD1Q9BQ69 325 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 TMEM9BQ9NQ34 198 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 G6PC2Q9NQR9 355 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 ATP23Q9Y6H3 246 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 C9orf170A2RU37 121 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 TUSC2O75896 110 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 MAMSTRQ6ZN01 415 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR13H1Q8NG92 308 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 RNASEH2CQ8TDP1 164 aaKnown RBP3.56□□□□□ -1.84
USH2A-201ENST00000307340 HSD17B8Q92506 261 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 CITED1Q99966 193 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OVOL2Q9BRP0 275 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 OR51B4Q9Y5P0 310 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 H3BQ85 93 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 SAPCD1Q5SSQ6 148 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 ZNF813Q6ZN06 617 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 DOCK7Q96N67 2140 aa3.56□□□□□ -1.84
USH2A-201ENST00000307340 A6NCN8 305 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms