RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 FAM216BQ8N7L0 139 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 ZSCAN4Q8NAM6 433 aaPredicted RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 TMEM104Q8NE00 496 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 PXT1Q8NFP0 134 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 OR5T2Q8NGG2 359 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 OR51F2Q8NH61 342 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 TNFAIP8L1Q8WVP5 186 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 DACT3Q96B18 629 aaPredicted RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 CEP19Q96LK0 163 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 SMR3AQ99954 134 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 RBM38Q9H0Z9 239 aaKnown RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 ZNF665Q9H7R5 613 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 EXOSC4Q9NPD3 245 aaKnown RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 IL36GQ9NZH8 169 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 NLKQ9UBE8 527 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 AK6Q9Y3D8 172 aaKnown RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 PPIAL4AQ9Y536 164 aa4.9□□□□□ -1.63
SSX3-201ENST00000298396 SETD2Q9BYW2 2564 aaPredicted RBP4.9□□□□□ -1.63
SSX3-201ENST00000298396 A0A0A6YYD4 124 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 ISPDA4D126 451 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 RFPL4AA6NLU0 287 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 LRRC30A6NM36 301 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 OR2AT4A6NND4 320 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 RFPL4AL1F8VTS6 287 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 SLC17A2O00624 439 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 LDLRAD4O15165 306 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 AIREO43918 545 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 ZNF737O75373 536 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 ARL6IP5O75915 188 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 NXPH2O95156 264 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 GABARAPO95166 117 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 WNT2P09544 360 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 IGHV4-31P0DP07 118 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 TMEM225BP0DP42 221 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 SLC2A2P11168 524 aaPredicted RBP4.89□□□□□ -1.63
SSX3-201ENST00000298396 MUC1P15941 1255 aaPredicted RBP4.89□□□□□ -1.63
SSX3-201ENST00000298396 PRKACAP17612 351 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 USF1P22415 310 aaPredicted RBP4.89□□□□□ -1.63
SSX3-201ENST00000298396 GLRA1P23415 457 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 DUSP1P28562 367 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 RPS19P39019 145 aaKnown RBP4.89□□□□□ -1.63
SSX3-201ENST00000298396 RPL5P46777 297 aaKnown RBP4.89□□□□□ -1.63
SSX3-201ENST00000298396 MTNR1BP49286 362 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 EFNB2P52799 333 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 SNU13P55769 128 aaKnown RBP4.89□□□□□ -1.63
SSX3-201ENST00000298396 CLDN12P56749 244 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 VBP1P61758 197 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 PAX2Q02962 417 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 ZNF146Q15072 292 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 PDCD1Q15116 288 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 P2RY14Q15391 338 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 DGUOKQ16854 277 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 CR1LQ2VPA4 569 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 PIGYQ3MUY2 71 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 HES5Q5TA89 166 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 ATPAF1Q5TC12 328 aaPredicted RBP4.89□□□□□ -1.63
SSX3-201ENST00000298396 GPR107Q5VW38 600 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 SIGIRRQ6IA17 410 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 OR10K2Q6IF99 312 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 GLIPR1L1Q6UWM5 242 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 ZNF788Q6ZQV5 615 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 CDH26Q8IXH8 852 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 C1orf87Q8N0U7 546 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 FAM58AQ8N1B3 248 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 NKAIN3Q8N8D7 197 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 OR51T1Q8NGJ9 327 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 ZNF671Q8TAW3 534 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 NDNFQ8TB73 568 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 THRSPQ92748 146 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 RAB1CQ92928 201 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 GPER1Q99527 375 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 CCL13Q99616 98 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 UQCC2Q9BRT2 126 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 BARHL1Q9BZE3 327 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 ELL3Q9HB65 397 aaPredicted RBP4.89□□□□□ -1.63
SSX3-201ENST00000298396 PATZ1Q9HBE1 687 aaKnown RBP4.89□□□□□ -1.63
SSX3-201ENST00000298396 NEK6Q9HC98 313 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 TCF7L1Q9HCS4 588 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 VCX3AQ9NNX9 186 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 HMG20AQ9NP66 347 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 KAAG1Q9UBP8 84 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 CKLFQ9UBR5 152 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 SSR3Q9UNL2 185 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 MRPS28Q9Y2Q9 187 aaKnown RBP4.89□□□□□ -1.63
SSX3-201ENST00000298396 POLDIP2Q9Y2S7 368 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 MAB21L2Q9Y586 359 aa4.89□□□□□ -1.63
SSX3-201ENST00000298396 NIPBLQ6KC79 2804 aaeCLIP4.88□□□□□ -1.63
SSX3-201ENST00000298396 TRAV38-1A0A0B4J264 116 aa4.88□□□□□ -1.63
SSX3-201ENST00000298396 TRAV24A0A0B4J272 114 aa4.88□□□□□ -1.63
SSX3-201ENST00000298396 TMEM272A0A1B0GTI8 110 aa4.88□□□□□ -1.63
SSX3-201ENST00000298396 IFITM5A6NNB3 132 aa4.88□□□□□ -1.63
SSX3-201ENST00000298396 FOXI3A8MTJ6 420 aaPredicted RBP4.88□□□□□ -1.63
SSX3-201ENST00000298396 TMEM14DPA8MWL7 114 aa4.88□□□□□ -1.63
SSX3-201ENST00000298396 A8MXK9 166 aa4.88□□□□□ -1.63
SSX3-201ENST00000298396 TRAPPC2LH3BP13 241 aa4.88□□□□□ -1.63
SSX3-201ENST00000298396 SIGLEC5O15389 551 aa4.88□□□□□ -1.63
SSX3-201ENST00000298396 MAGEB3O15480 346 aa4.88□□□□□ -1.63
SSX3-201ENST00000298396 PHF1O43189 567 aaPredicted RBP4.88□□□□□ -1.63
SSX3-201ENST00000298396 ADAM20O43506 726 aa4.88□□□□□ -1.63
SSX3-201ENST00000298396 KNG1P01042 644 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms