RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 OR6C6A6NF89 314 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 MPPED1O15442 326 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 PITX3O75364 302 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 CBR1P16152 277 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 AADACP22760 399 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 SRSF7Q16629 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCT3-201ENST00000295688 PIGYQ3MUY2 71 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 WDR5BQ86VZ2 330 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 SPEM1Q8N4L4 309 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 SLC35G3Q8N808 338 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 ZNF700Q9H0M5 742 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 SH3BGRL3Q9H299 93 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 KIAA1549Q9HCM3 1950 aa12.84□□□□□ -0.35
CCT3-201ENST00000295688 IGHV1-45A0A0A0MS14 117 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 DUXBA0A1W2PPF3 345 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A10PA6NDY2 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A18PA6NE21 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A16PA6NEW6 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A20PA6NIJ5 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A8PA6NJQ4 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A7PA6NKC0 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A22PA8MWA6 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A12PA8MX19 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A5PA8MXJ8 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A23PA8MXZ1 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 TNFSF11O14788 317 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 PPYP01298 95 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A15PP0C7V4 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A13PP0C7W8 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A14PP0C7W9 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM90A24PP0C7X0 464 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 CCL3P10147 92 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 NKX2-1P43699 371 aaPredicted RBP12.83□□□□□ -0.36
CCT3-201ENST00000295688 HTR5AP47898 357 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FHITP49789 147 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 Q6ZS49 121 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 DPPA2Q7Z7J5 298 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 ISOC2Q96AB3 205 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 IMMP1LQ96LU5 166 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 C20orf24Q9BUV8 137 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 PAPOLGQ9BWT3 736 aaKnown RBP12.83□□□□□ -0.36
CCT3-201ENST00000295688 TMEM222Q9H0R3 208 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 ZNF442Q9H7R0 627 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 IGKV1-12A0A0C4DH73 117 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 IGKV1D-12P01611 117 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FGF5P12034 268 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 MMP9P14780 707 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 RBM11P57052 281 aaKnown RBP12.83□□□□□ -0.36
CCT3-201ENST00000295688 RND3P61587 244 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 ADAM5Q6NVV9 412 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 ZNF695Q8IW36 515 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 OR11L1Q8NGX0 322 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 OR2G3Q8NGZ4 309 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 KCNE4Q8WWG9 221 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 ZNF837Q96EG3 531 aaPredicted RBP12.83□□□□□ -0.36
CCT3-201ENST00000295688 JSRP1Q96MG2 331 aaPredicted RBP12.83□□□□□ -0.36
CCT3-201ENST00000295688 TMEM56Q96MV1 263 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 C11orf1Q9H5F2 150 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 ZNF576Q9H609 170 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 PROK2Q9HC23 129 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 UBE2J1Q9Y385 318 aaPredicted RBP12.83□□□□□ -0.36
CCT3-201ENST00000295688 TMEM56-RWDD3S4R434 201 aa12.83□□□□□ -0.36
CCT3-201ENST00000295688 CABIN1Q9Y6J0 2220 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 ZNF816-ZNF321PA0A0X1KG74 233 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 hCG_38984A0A1B0GV85 526 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 C1QL1O75973 258 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 OR2C1O95371 312 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 OR13C7P0DN81 318 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 ZNF32P17041 273 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 EPHA8P29322 1005 aaPredicted RBP12.82□□□□□ -0.36
CCT3-201ENST00000295688 VAMP2P63027 116 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 IL11RAQ14626 422 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 PLCXD3Q63HM9 321 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 MEX3BQ6ZN04 569 aaKnown RBP12.82□□□□□ -0.36
CCT3-201ENST00000295688 GNPNAT1Q96EK6 184 aaPredicted RBP12.82□□□□□ -0.36
CCT3-201ENST00000295688 TP53RKQ96S44 253 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 CRLF2Q9HC73 371 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 SH2D2AQ9NP31 389 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 DMRT1Q9Y5R6 373 aa12.82□□□□□ -0.36
CCT3-201ENST00000295688 PIGBOS1A0A0B4J2F0 54 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 FAM221AA4D161 298 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 RBFOX3A6NFN3 312 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 WRBO00258 174 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 KLK3P07288 261 aaPredicted RBP12.81□□□□□ -0.36
CCT3-201ENST00000295688 DAOP14920 347 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 PPP1CCP36873 323 aaKnown RBP12.81□□□□□ -0.36
CCT3-201ENST00000295688 RAB2AP61019 212 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 RSPO4Q2I0M5 234 aaPredicted RBP12.81□□□□□ -0.36
CCT3-201ENST00000295688 HIKESHIQ53FT3 197 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 AAED1Q7RTV5 226 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 DYRK2Q92630 601 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 SRXN1Q9BYN0 137 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 ZNF581Q9P0T4 197 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 ARID1AO14497 2285 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 XIRP2A4UGR9 3374 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 hCG_1809904A0A1W2PP81 198 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 A0A1W2PR64 198 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 A0A1W2PRV1 198 aa12.81□□□□□ -0.36
CCT3-201ENST00000295688 NKX2-6A6NCS4 301 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms