RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 FBXL17Q9UF56 701 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 PAPPA2Q9BXP8 1791 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 IGHV3-72A0A0B4J1Y9 119 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 A0A1W2PPQ1 181 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 PMCHP20382 165 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 RAC3P60763 192 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 CGB2Q6NT52 195 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 FUNDC1Q8IVP5 155 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 OR13F1Q8NGS4 319 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 NOL4LQ96MY1 436 aaPredicted RBP14.24□□□□□ -0.13
CLN5-208ENST00000636183 C12orf10Q9HB07 376 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 BCL3P20749 454 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 YBX1P67809 324 aaKnown RBP14.24□□□□□ -0.13
CLN5-208ENST00000636183 ZNF528Q3MIS6 628 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 KRTCAP3Q53RY4 240 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 FAM162BQ5T6X4 162 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 FABP4P15090 132 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 MUC15Q8N387 334 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 OR4S2Q8NH73 311 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 PRR35P0CG20 571 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 OR2B8PP59922 312 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 AMER3Q8N944 861 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 ZNF586Q9NXT0 402 aa14.24□□□□□ -0.13
CLN5-208ENST00000636183 A0A1B0GUH1 482 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 IFITM5A6NNB3 132 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 ZNHIT1O43257 154 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 OR4E1P0C645 316 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 SELENOPP49908 381 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 PDLIM4P50479 330 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 LILRA6Q6PI73 481 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 MAVSQ7Z434 540 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 FAM222BQ8WU58 562 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 MS4A10Q96PG2 267 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 MIEN1Q9BRT3 115 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 FZD6O60353 706 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 DEFA6Q01524 100 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 ZBTB37Q5TC79 503 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 TMEM129A0AVI4 362 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 ZNF207O43670 478 aaKnown RBP14.23□□□□□ -0.13
CLN5-208ENST00000636183 LIFP15018 202 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 UQCRFS1P47985 274 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 PDPNQ86YL7 162 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 MRPL37Q9BZE1 423 aaKnown RBP14.23□□□□□ -0.13
CLN5-208ENST00000636183 SS18L1O75177 396 aaPredicted RBP14.23□□□□□ -0.13
CLN5-208ENST00000636183 LIMS3P0CW19 117 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 LIMS4P0CW20 117 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 CDC20Q12834 499 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 PMS2CLQ68D20 193 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 CCDC144NLQ6NUI1 221 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 METTL26Q96S19 204 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 PNPP00491 289 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 FAM87AP0C7U9 286 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 KIR3DL2P43630 455 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 SUMO1P63165 101 aaKnown RBP14.23□□□□□ -0.13
CLN5-208ENST00000636183 VSTM2AQ8TAG5 236 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 ZNF768Q9H5H4 540 aaKnown RBP14.23□□□□□ -0.13
CLN5-208ENST00000636183 SLC2A9Q9NRM0 540 aa14.23□□□□□ -0.13
CLN5-208ENST00000636183 KNTC1P50748 2209 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 SLC38A11Q08AI6 406 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 SLC25A46Q96AG3 418 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 ZNF416Q9BWM5 594 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 C5P01031 1676 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 WNT5AP41221 380 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 GNG4P50150 75 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 SULT1A1P50225 295 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 LINC01560Q8TB33 94 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 DDX60Q8IY21 1712 aaKnown RBP14.22□□□□□ -0.13
CLN5-208ENST00000636183 OOEPA6NGQ2 149 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 TFAP2AP05549 437 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 PNLIPRP3Q17RR3 467 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 PLEKHA2Q9HB19 425 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 TMEM140Q9NV12 185 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 PLPP3O14495 311 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 FAM106CPP0CH98 169 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 DRD3P35462 400 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 EMP1P54849 157 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 SLC37A1P57057 533 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 TOMM34Q15785 309 aaPredicted RBP14.22□□□□□ -0.13
CLN5-208ENST00000636183 APC2O95996 2303 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 TMSB15BA0A087X1C1 80 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 CSN3P07498 182 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 USF1P22415 310 aaPredicted RBP14.22□□□□□ -0.13
CLN5-208ENST00000636183 ATP1A1-AS1Q5TC04 95 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 LINC01555Q8NAE3 123 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 ZFAND2BQ8WV99 257 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 STARD4Q96DR4 205 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 GMPPAQ96IJ6 420 aaPredicted RBP14.22□□□□□ -0.13
CLN5-208ENST00000636183 HARBI1Q96MB7 349 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 BCL2L10Q9HD36 194 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 MYH7BA7E2Y1 1941 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 IGKV3-20P01619 116 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 LGALSLQ3ZCW2 172 aaPredicted RBP14.22□□□□□ -0.13
CLN5-208ENST00000636183 FAHD1Q6P587 224 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 TMEM88Q6PEY1 159 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 DOLPP1Q86YN1 238 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 OR52B4Q8NGK2 314 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 AUNIPQ9H7T9 357 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 CACNG5Q9UF02 275 aa14.22□□□□□ -0.13
CLN5-208ENST00000636183 ERVFRD-1P60508 538 aa14.21□□□□□ -0.13
CLN5-208ENST00000636183 LAMTOR1Q6IAA8 161 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms