RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 OR2T35Q8NGX2 323 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 OR2AJ1Q8NGZ0 328 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 OR2AE1Q8NHA4 323 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 SYNPRQ8TBG9 265 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 KLF14Q8TD94 323 aaPredicted RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 C10orf105Q8TEF2 133 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 GIMAP1Q8WWP7 306 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 RDH5Q92781 318 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ERGIC1Q969X5 290 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 CMBLQ96DG6 245 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 PHYHIPLQ96FC7 376 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF799Q96GE5 643 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 C1orf159Q96HA4 380 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 LYZL4Q96KX0 146 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 SCGB3A2Q96PL1 93 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 TBX5Q99593 518 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 C1QTNF5Q9BXJ0 243 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 C20orf85Q9H1P6 137 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 PPIL3Q9H2H8 161 aaKnown RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 LIN7BQ9HAP6 207 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 DYNLRB1Q9NP97 96 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 PLSCR3Q9NRY6 295 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 CENPMQ9NSP4 180 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 MRM2Q9UI43 246 aaKnown RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF391Q9UJN7 358 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 AK6Q9Y3D8 172 aaKnown RBP4.46□□□□□ -1.7
SHMT1-211ENST00000618902 WNK2Q9Y3S1 2297 aa4.46□□□□□ -1.7
SHMT1-211ENST00000618902 TRAV6A0A075B6T7 132 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 PPIAL4EA0A075B759 164 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 PPIAL4CA0A0B4J2A2 164 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 LOC100289279A0A1B0GTE1 492 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 ZSCAN5BA6NJL1 495 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 OR4C45A6NMZ5 311 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 C17orf100A8MU93 164 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 A8MV72 311 aaPredicted RBP4.45□□□□□ -1.7
SHMT1-211ENST00000618902 VWC2LB2RUY7 222 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 MCRIP1C9JLW8 97 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF878C9JN71 531 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 PPIAL4DF5H284 164 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 LYNX1G3V0Z9 82 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 H7C1Q1 480 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 L7N2F9 121 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 SLC17A2O00624 439 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 LANCL1O43813 399 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 BPNT1O95861 308 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 LCATP04180 440 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 CHRM2P08172 466 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 CD55P08174 381 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 CD3GP09693 182 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 PPIAL4FP0DN26 164 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 LYNX1P0DP58 116 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 NAT2P11245 290 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 SNRPBP14678 240 aaKnown RBP4.45□□□□□ -1.7
SHMT1-211ENST00000618902 RAC2P15153 192 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 RPA2P15927 270 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 TNFRSF1AP19438 455 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 FSTP19883 344 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 HNF1AP20823 631 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 S100A11P31949 105 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 CX3CR1P49238 355 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 RIDAP52758 137 aaKnown RBP4.45□□□□□ -1.7
SHMT1-211ENST00000618902 OR10A3P58181 314 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF121P58317 390 aaPredicted RBP4.45□□□□□ -1.7
SHMT1-211ENST00000618902 UBE2MP61081 183 aaKnown RBP4.45□□□□□ -1.7
SHMT1-211ENST00000618902 DGCR2P98153 550 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF92Q03936 586 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 MFGE8Q08431 387 aaPredicted RBP4.45□□□□□ -1.7
SHMT1-211ENST00000618902 GK2Q14410 553 aaPredicted RBP4.45□□□□□ -1.7
SHMT1-211ENST00000618902 OPCMLQ14982 345 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 NHLRC3Q5JS37 347 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 GLYATL3Q5SZD4 288 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 CYB5R2Q6BCY4 276 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 OR2T2Q6IF00 324 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 FBXW12Q6X9E4 464 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 PEG10Q86TG7 708 aaKnown RBP4.45□□□□□ -1.7
SHMT1-211ENST00000618902 STPG2Q8N412 459 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 FTMTQ8N4E7 242 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 ZNF676Q8N7Q3 588 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 SPERTQ8NA61 448 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 OR8B12Q8NGG6 310 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 OR6M1Q8NGM8 313 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 OR2G2Q8NGZ5 317 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 SCARB1Q8WTV0 552 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 THEM6Q8WUY1 208 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 DACT3Q96B18 629 aaPredicted RBP4.45□□□□□ -1.7
SHMT1-211ENST00000618902 SGK3Q96BR1 496 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 ELMOD3Q96FG2 381 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 TIMD4Q96H15 378 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 OR14A2Q96R54 314 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 OR8B4Q96RC9 309 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 OCSTAMPQ9BR26 566 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 FGF23Q9GZV9 251 aaPredicted RBP4.45□□□□□ -1.7
SHMT1-211ENST00000618902 SLC25A32Q9H2D1 315 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 PPA2Q9H2U2 334 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 HEXA-AS1Q9H8Q6 139 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 G6PC2Q9NQR9 355 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 FAM206AQ9NX38 181 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 FRRS1LQ9P0K9 344 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 TAAR3PQ9P1P4 343 aa4.45□□□□□ -1.7
SHMT1-211ENST00000618902 FBLN5Q9UBX5 448 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 355.6 ms