RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 PBOV1Q9GZY1 135 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 HES4Q9HCC6 221 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 M0R1B8 84 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 ADAP1O75689 374 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 KCND3Q9UK17 655 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 PRSS37A4D1T9 235 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 FZD6O60353 706 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 DUS4LO95620 317 aaKnown RBP7.79□□□□□ -1.16
CSMD1-216ENST00000602557 BPIFB3P59826 476 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 MPV17LQ2QL34 196 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 TTC32Q5I0X7 151 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 RPS19BP1Q86WX3 136 aaKnown RBP7.79□□□□□ -1.16
CSMD1-216ENST00000602557 ATOH7Q8N100 152 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 NEIL1Q96FI4 390 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-216ENST00000602557 MED29Q9NX70 200 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 F11RQ9Y624 299 aaKnown RBP7.79□□□□□ -1.16
CSMD1-216ENST00000602557 CRXO43186 299 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-216ENST00000602557 G6PCP35575 357 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 ZNF121P58317 390 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-216ENST00000602557 MYBPHQ13203 477 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 TMEM128Q5BJH2 165 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 CYB561D1Q8N8Q1 229 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 TGIF2-C20orf24A0A0A6YYL0 155 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 FAM24AA6NFZ4 105 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 LANCL1O43813 399 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 BTG2P78543 158 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 ZNF816Q0VGE8 651 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-216ENST00000602557 ALKBH6Q3KRA9 238 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 SPATA46Q5T0L3 261 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 ACSM6Q6P461 480 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 SLC22A20A6NK97 555 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 GALR2O43603 387 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-216ENST00000602557 TMEM33P57088 247 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 IL10RAQ13651 578 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 ABHD1Q96SE0 405 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 IL19Q9UHD0 177 aa7.79□□□□□ -1.16
CSMD1-216ENST00000602557 IFITM10A6NMD0 228 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 H7C2G1 150 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 ARR3P36575 388 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 AESQ08117 197 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 FZD2Q14332 565 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 BTNL3Q6UXE8 466 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 MAP1LC3CQ9BXW4 147 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 HS3ST3A1Q9Y663 406 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 A0A1W2PN81 502 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 CD22P20273 847 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 SAMD13Q5VXD3 122 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 FGF20Q9NP95 211 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-216ENST00000602557 ADAMTSL3P82987 1691 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 OR2M5A3KFT3 312 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 APCSP02743 223 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 CAPZBP47756 277 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 ZDHHC23Q8IYP9 409 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 DEFB127Q9H1M4 99 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 KCNK7Q9Y2U2 307 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 R4GMQ9 66 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 RRP8O43159 456 aaKnown RBP7.78□□□□□ -1.16
CSMD1-216ENST00000602557 PGFP49763 221 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 DYNLT3P51808 116 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 RPS23P62266 143 aaKnown RBP7.78□□□□□ -1.16
CSMD1-216ENST00000602557 PYCR3Q53H96 274 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 TECRQ9NZ01 308 aaKnown RBP7.78□□□□□ -1.16
CSMD1-216ENST00000602557 LDLRAD4O15165 306 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 WNT3P56703 355 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 EGR3Q06889 387 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 SMIM21Q3B7S5 101 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 ZNF343Q6P1L6 599 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 CPEB3Q8NE35 698 aaKnown RBP7.78□□□□□ -1.16
CSMD1-216ENST00000602557 MFNGO00587 321 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 DEFB108BQ8NET1 73 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 OR1P1Q8NH06 330 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 LAT2Q9GZY6 243 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 HYAL3O43820 417 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-216ENST00000602557 EMP1P54849 157 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 RBM11P57052 281 aaKnown RBP7.78□□□□□ -1.16
CSMD1-216ENST00000602557 SLC38A11Q08AI6 406 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 DUSP8Q13202 625 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 WFDC8Q8IUA0 241 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 AMER3Q8N944 861 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 ZDHHC22Q8N966 263 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 GFYI3L273 518 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 DEDDO75618 318 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 HRASP01112 189 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 KRASP01116 189 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 TRAT1Q6PIZ9 186 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 TSEN54Q7Z6J9 526 aaKnown RBP7.78□□□□□ -1.16
CSMD1-216ENST00000602557 S1PR3Q99500 378 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 TXNIPQ9H3M7 391 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 ST3GAL6Q9Y274 331 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 DNLZQ5SXM8 178 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 SLC25A26Q70HW3 274 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 MIXL1Q9H2W2 232 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 SLC25A19Q9HC21 320 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 OPN4Q9UHM6 478 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 A0A0B4J293 547 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 PLA2G10O15496 165 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 TGIF1Q15583 401 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 ARHGEF39Q8N4T4 335 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 COMMD5Q9GZQ3 224 aa7.78□□□□□ -1.16
CSMD1-216ENST00000602557 R3HDMLQ9H3Y0 253 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms