RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 TCEANCQ8N8B7 351 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 YIPF7Q8N8F6 280 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 OR5AU1Q8NGC0 362 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 NDNFQ8TB73 568 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 ZNF596Q8TC21 504 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 OCSTAMPQ9BR26 566 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 CHST5Q9GZS9 411 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 LIN7BQ9HAP6 207 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 IGHV2-26A0A0B4J1V2 119 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 ZAR1LA6NP61 321 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 ADARB2-AS1A8MUL3 147 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 HAND1O96004 215 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 RBP2P50120 134 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 ZNF146Q15072 292 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 UBE2V2Q15819 145 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 GRK1Q15835 563 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 PLEKHG7Q6ZR37 379 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 SLC25A26Q70HW3 274 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 CENPVQ7Z7K6 275 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 TRMT10AQ8TBZ6 339 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 STMN2Q93045 179 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 UTP4Q969X6 686 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 PHF21AQ96BD5 680 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 CADM1Q9BY67 442 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 TTTY10Q9BZA0 68 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 GAL3ST2Q9H3Q3 398 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 RHOFQ9HBH0 211 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 KRT84Q9NSB2 600 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 DPM3Q9P2X0 92 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 HILPDAQ9Y5L2 63 aa14.31□□□□□ -0.12
SHKBP1-227ENST00000602011 RYR3Q15413 4870 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 TMEM82A0PJX8 343 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 A6NIN4 97 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 CLIC3O95833 236 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 UBCP0CG48 685 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 PRKACBP22694 351 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 BDH1Q02338 343 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 LDLRAD2Q5SZI1 272 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 C12orf73Q69YU5 71 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 FAM58AQ8N1B3 248 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 EMG1Q92979 244 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 AURKAIP1Q9NWT8 199 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 TAS2R3Q9NYW6 316 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 POMPQ9Y244 141 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 PCDHGB5Q9Y5G0 923 aa14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 TSSC4Q9Y5U2 329 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-227ENST00000602011 TRBV2A0A0J9YWF9 115 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 LEUTXA8MZ59 168 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 G3V2T6 193 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 M0QZK8 103 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 SH2D1BO14796 132 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 RPP14O95059 124 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 PF4V1P10720 104 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 GABRR1P24046 479 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 HTR1FP30939 366 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 ATP6V1E1P36543 226 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 CEACAM3P40198 252 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 ZNF91Q05481 1191 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 EDDM3AQ14507 147 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 TMEM244Q5VVB8 128 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 KCTD20Q7Z5Y7 419 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 ZDHHC13Q8IUH4 622 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 CORO2AQ92828 525 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 RFKQ969G6 155 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 SLAMF9Q96A28 289 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 RCC1LQ96I51 464 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 OR5M11Q96RB7 305 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 GPR61Q9BZJ8 451 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 NEK6Q9HC98 313 aa14.29□□□□□ -0.12
SHKBP1-227ENST00000602011 TRGV10A0A0A0MS01 117 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 OOSP1A8MZH6 123 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 F8VVB4 439 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 F8VWA3 439 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 MAGEB4O15481 346 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 RPSAP08865 295 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 P2RX3P56373 397 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 SLC35A2P78381 396 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 FOXB2Q5VYV0 432 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 KDM4DQ6B0I6 523 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 CCDC144NLQ6NUI1 221 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 HEPN1Q6WQI6 88 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 UTS2BQ765I0 119 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 BATF2Q8N1L9 274 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 ABHD12Q8N2K0 398 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 OR4X2Q8NGF9 303 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 SPSB1Q96BD6 273 aa14.28□□□□□ -0.12
SHKBP1-227ENST00000602011 IGKV1-27A0A075B6S5 117 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 A0A1W2PQL4 384 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 TCRBV4S1A1TA0A5B7 111 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 LMO1P25800 156 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 PRRX1P54821 245 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 MTCP1P56278 107 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 LHFPL2Q6ZUX7 228 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 TCF23Q7RTU1 214 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 FAM220AQ7Z4H9 259 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 BCDIN3DQ7Z5W3 292 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 TRAPPC6BQ86SZ2 158 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 OR52N4Q8NGI2 321 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 OR4P4Q8NGL7 312 aa14.27□□□□□ -0.13
SHKBP1-227ENST00000602011 OR8J1Q8NGP2 316 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms