RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ANAPC10Q9UM13 185 aa15□□□□□ -0.01
SHKBP1-224ENST00000600718 RP1L1Q8IWN7 2480 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 PLSCR5A0PG75 271 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 VSTM5A8MXK1 200 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 CDIPTO14735 213 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 PDCD6O75340 191 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 CD3DP04234 171 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 FUT3P21217 361 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 PMELP40967 661 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 MAB21L1Q13394 359 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 CDSNQ15517 529 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 MPV17LQ2QL34 196 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 FAM58AQ8N1B3 248 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 BATF2Q8N1L9 274 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 CREB3L1Q96BA8 519 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 MRPL37Q9BZE1 423 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 TLNRD1Q9H1K6 362 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 MCUBQ9NWR8 336 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 TAAR3PQ9P1P4 343 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 NUBP2Q9Y5Y2 271 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 PRR14LQ5THK1 2151 aa14.99□□□□□ -0.01
SHKBP1-224ENST00000600718 ZNF736B4DX44 427 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 TCRBP04435 133 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 PRKACAP17612 351 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 NAT1P18440 290 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 HTR2BP41595 481 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 CCR6P51684 374 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 TLE1Q04724 770 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 SFRP4Q6FHJ7 346 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 OR2Z1Q8NG97 314 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 OR4C16Q8NGL9 310 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 ZNF488Q96MN9 340 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 FAAP24Q9BTP7 215 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 A0A0B4J293 547 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 NOS1APO75052 506 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 OR7C1O76099 320 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 RAB3DO95716 219 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 CD74P04233 296 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 FCER2P06734 321 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 PGA5P0DJD9 388 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 CD200P41217 278 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 GZMKP49863 264 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 ERVK11-1P61568 191 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 CD83Q01151 205 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 IL13RA2Q14627 380 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 ZNF767PQ75MW2 155 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 C11orf53Q8IXP5 236 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 GVQW1Q8N7I0 195 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 LINC01560Q8TB33 94 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 EMG1Q92979 244 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 HS3ST6Q96QI5 342 aa14.98□□□□□ -0.01
SHKBP1-224ENST00000600718 HEATR1Q9H583 2144 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 SPTA1P02549 2419 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 ZSCAN5BA6NJL1 495 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 C1QBP02746 253 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 TBPP20226 339 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 M6PRP20645 277 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 AGAP20933 346 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 GRNP28799 593 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 BTG1P62324 171 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 DAZAP2Q15038 168 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 ZNF782Q6ZMW2 699 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 BTN2A1Q7KYR7 527 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 FBXW5Q969U6 566 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 UPRTQ96BW1 309 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 PLPPR2Q96GM1 343 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 NRIP2Q9BQI9 281 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 ZNF581Q9P0T4 197 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 PKD1L2Q7Z442 2459 aa14.97□□□□□ -0.01
SHKBP1-224ENST00000600718 INMT-MINDY4F8WBC2 141 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 OR3A3P47888 321 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 UQCRFS1P47985 274 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 MEF2DQ14814 521 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 PDCD1Q15116 288 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 FAAP20Q6NZ36 180 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 HOGA1Q86XE5 327 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 ZNF808Q8N4W9 903 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 POC1AQ8NBT0 407 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 SULT4A1Q9BR01 284 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 AK3Q9UIJ7 227 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 ATRXP46100 2492 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 TUBAL3A6NHL2 446 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 PTBP3O95758 552 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 CD3EP07766 207 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 SNU13P55769 128 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 TFF3Q07654 80 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 SNTB1Q13884 538 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 ADIPOQQ15848 244 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 NKPD1Q17RQ9 610 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 ADAM5Q6NVV9 412 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 CCDC28AQ8IWP9 274 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 OR4S1Q8NGB4 309 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 OR4D10Q8NGI6 311 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 GTF3AQ92664 365 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 ELMOD3Q96FG2 381 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 CMSS1Q9BQ75 279 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 SPACA1Q9HBV2 294 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 PLEKHA6Q9Y2H5 1048 aa14.96□□□□□ -0.01
SHKBP1-224ENST00000600718 ITPR1Q14643 2758 aa14.96□□□□□ -0.02
SHKBP1-224ENST00000600718 IGHV3-64DA0A0J9YX35 117 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms