RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 P2RX4Q99571 388 aa11.85□□□□□ -0.51
XRCC1-209ENST00000599693 CADM1Q9BY67 442 aaKnown RBP11.85□□□□□ -0.51
XRCC1-209ENST00000599693 CHST6Q9GZX3 395 aa11.85□□□□□ -0.51
XRCC1-209ENST00000599693 SEBOXQ9HB31 216 aaPredicted RBP11.85□□□□□ -0.51
XRCC1-209ENST00000599693 PAPOLBQ9NRJ5 636 aaKnown RBP11.85□□□□□ -0.51
XRCC1-209ENST00000599693 GTF2A1LQ9UNN4 478 aa11.85□□□□□ -0.51
XRCC1-209ENST00000599693 COPS3Q9UNS2 423 aa11.85□□□□□ -0.51
XRCC1-209ENST00000599693 UBE2J1Q9Y385 318 aaPredicted RBP11.85□□□□□ -0.51
XRCC1-209ENST00000599693 LSM4Q9Y4Z0 139 aaKnown RBP11.85□□□□□ -0.51
XRCC1-209ENST00000599693 PCDHGB5Q9Y5G0 923 aa11.85□□□□□ -0.51
XRCC1-209ENST00000599693 TMEM14AQ9Y6G1 99 aa11.85□□□□□ -0.51
XRCC1-209ENST00000599693 BIRC6Q9NR09 4857 aa11.85□□□□□ -0.51
XRCC1-209ENST00000599693 SACSQ9NZJ4 4579 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 NUDT19A8MXV4 375 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 MGST3O14880 152 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 ZFPL1O95159 310 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 IGLV1-47P01700 117 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 P2RX3P56373 397 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 CBX1P83916 185 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 CDK5Q00535 292 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 FAM98BQ52LJ0 330 aaKnown RBP11.84□□□□□ -0.51
XRCC1-209ENST00000599693 PRAMEF5Q5TYX0 476 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 EGFL6Q8IUX8 553 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 ELMOD2Q8IZ81 293 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 KLHL30-AS1Q8NEE0 82 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 OR52N4Q8NGI2 321 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 EMG1Q92979 244 aaKnown RBP11.84□□□□□ -0.51
XRCC1-209ENST00000599693 ZFP57Q9NU63 452 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 NDE1Q9NXR1 346 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 OR52A1Q9UKL2 312 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 SLC7A11Q9UPY5 501 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 MOB4Q9Y3A3 225 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 R4GMQ9 66 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 HSPE1-MOB4S4R3N1 261 aa11.84□□□□□ -0.51
XRCC1-209ENST00000599693 TENM2Q9NT68 2774 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 IGKV1-27A0A075B6S5 117 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 CCDC182A6NF36 153 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 PSPNO60542 156 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 INMTO95050 263 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 OSMP13725 252 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 ERP29P30040 261 aaKnown RBP11.83□□□□□ -0.52
XRCC1-209ENST00000599693 CEACAM3P40198 252 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 OR3A4PP47883 348 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 ZNF91Q05481 1191 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 TPTE2P1Q5T6R2 138 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 HEPN1Q6WQI6 88 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 ENTHD1Q8IYW4 607 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 CREB3L1Q96BA8 519 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 IL36RNQ9UBH0 155 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 TAGLN3Q9UI15 199 aa11.83□□□□□ -0.52
XRCC1-209ENST00000599693 EPPK1P58107 5090 aaKnown RBP11.82□□□□□ -0.52
XRCC1-209ENST00000599693 TRGV10A0A0A0MS01 117 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 FAM172BPA6NC97 362 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 CCL1P22362 96 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 CDK2P24941 298 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 CD34P28906 385 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 OR3A1P47881 315 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 GP2P55259 537 aaKnown RBP11.82□□□□□ -0.52
XRCC1-209ENST00000599693 HLA-DRB5Q30154 266 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 CCDC144NLQ6NUI1 221 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 SLC25A26Q70HW3 274 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 Q8IYB0 196 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 CHPT1Q8WUD6 406 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 APOL4Q9BPW4 351 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 PLEKHA1Q9HB21 404 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 ZNF286AQ9HBT8 521 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 SLC25A19Q9HC21 320 aa11.82□□□□□ -0.52
XRCC1-209ENST00000599693 HUWE1Q7Z6Z7 4374 aaKnown RBP11.81□□□□□ -0.52
XRCC1-209ENST00000599693 OOSP1A8MZH6 123 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 LY6LH3BQJ8 138 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 BUB1B-PAK6H3BSN5 160 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 CST1P01037 141 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 DUSP1P28562 367 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 GDNFP39905 211 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 MNDAP41218 407 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 FUT6P51993 359 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 UBE2V2Q15819 145 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 TMEM236Q5W0B7 351 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 ZNF322Q6U7Q0 402 aaPredicted RBP11.81□□□□□ -0.52
XRCC1-209ENST00000599693 TMEM179BQ7Z7N9 219 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 DHFR2Q86XF0 187 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 NOL4LQ96MY1 436 aaPredicted RBP11.81□□□□□ -0.52
XRCC1-209ENST00000599693 PRR25Q96S07 402 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 CNN2Q99439 309 aaKnown RBP11.81□□□□□ -0.52
XRCC1-209ENST00000599693 TEX12Q9BXU0 123 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 ZNF556Q9HAH1 456 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 ARL8BQ9NVJ2 186 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 RBFOX1Q9NWB1 397 aaKnown RBP11.81□□□□□ -0.52
XRCC1-209ENST00000599693 TAS2R3Q9NYW6 316 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 GLS2Q9UI32 602 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 SNX5Q9Y5X3 404 aa11.81□□□□□ -0.52
XRCC1-209ENST00000599693 KIAA2026Q5HYC2 2103 aa11.8□□□□□ -0.52
XRCC1-209ENST00000599693 TRBV2A0A0J9YWF9 115 aa11.8□□□□□ -0.52
XRCC1-209ENST00000599693 TOR1AO14656 332 aa11.8□□□□□ -0.52
XRCC1-209ENST00000599693 MAGEB4O15481 346 aaPredicted RBP11.8□□□□□ -0.52
XRCC1-209ENST00000599693 ENTPD6O75354 484 aa11.8□□□□□ -0.52
XRCC1-209ENST00000599693 GATBO75879 557 aaKnown RBP11.8□□□□□ -0.52
XRCC1-209ENST00000599693 FAM106CPP0CH98 169 aa11.8□□□□□ -0.52
XRCC1-209ENST00000599693 RAP2AP10114 183 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms