RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 IL18R1Q13478 541 aa18.48■□□□□ 0.55
CCDC9-204ENST00000599398 ZNF273Q14593 569 aa18.48■□□□□ 0.55
CCDC9-204ENST00000599398 OR2G6Q5TZ20 316 aa18.48■□□□□ 0.55
CCDC9-204ENST00000599398 SERPINA12Q8IW75 414 aa18.48■□□□□ 0.55
CCDC9-204ENST00000599398 DPAGT1Q9H3H5 408 aa18.48■□□□□ 0.55
CCDC9-204ENST00000599398 DSCAML1Q8TD84 2053 aa18.47■□□□□ 0.55
CCDC9-204ENST00000599398 ZNF737O75373 536 aa18.47■□□□□ 0.55
CCDC9-204ENST00000599398 GABRR1P24046 479 aa18.47■□□□□ 0.55
CCDC9-204ENST00000599398 ACSM1Q08AH1 577 aa18.47■□□□□ 0.55
CCDC9-204ENST00000599398 EDDM3AQ14507 147 aa18.47■□□□□ 0.55
CCDC9-204ENST00000599398 OGFRL1Q5TC84 451 aaPredicted RBP18.47■□□□□ 0.55
CCDC9-204ENST00000599398 RPL22L1Q6P5R6 122 aaKnown RBP18.47■□□□□ 0.55
CCDC9-204ENST00000599398 RNF144BQ7Z419 303 aa18.47■□□□□ 0.55
CCDC9-204ENST00000599398 OR8H2Q8N162 312 aa18.47■□□□□ 0.55
CCDC9-204ENST00000599398 SNX22Q96L94 193 aa18.47■□□□□ 0.55
CCDC9-204ENST00000599398 CHCHD3Q9NX63 227 aaKnown RBP18.47■□□□□ 0.55
CCDC9-204ENST00000599398 GLS2Q9UI32 602 aa18.47■□□□□ 0.55
CCDC9-204ENST00000599398 DIMT1Q9UNQ2 313 aaKnown RBP18.47■□□□□ 0.55
CCDC9-204ENST00000599398 EXOSC1Q9Y3B2 195 aaKnown RBP18.47■□□□□ 0.55
CCDC9-204ENST00000599398 MEX3AA1L020 520 aaKnown RBP18.46■□□□□ 0.55
CCDC9-204ENST00000599398 BTBD17A6NE02 478 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 CASQ2O14958 399 aaPredicted RBP18.46■□□□□ 0.55
CCDC9-204ENST00000599398 SULT1B1O43704 296 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 CAPGP40121 348 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 SOX2P48431 317 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 MED21Q13503 144 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 CCDC58Q4VC31 144 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 XAF1Q6GPH4 301 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 HCP5Q6MZN7 132 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 C8orf59Q8N0T1 100 aaPredicted RBP18.46■□□□□ 0.55
CCDC9-204ENST00000599398 PARP16Q8N5Y8 322 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 ZSCAN4Q8NAM6 433 aaPredicted RBP18.46■□□□□ 0.55
CCDC9-204ENST00000599398 TMEM80Q96HE8 168 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 CHST6Q9GZX3 395 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 VCXQ9H320 206 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 HEXA-AS1Q9H8Q6 139 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 ZNRD1Q9P1U0 126 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 HSPE1-MOB4S4R3N1 261 aa18.46■□□□□ 0.55
CCDC9-204ENST00000599398 IGKV1-12A0A0C4DH73 117 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 TMEM82A0PJX8 343 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 IGKV1D-12P01611 117 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 GNAO1P09471 354 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 MDKP21741 143 aaPredicted RBP18.45■□□□□ 0.54
CCDC9-204ENST00000599398 ERVFRD-1P60508 538 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 CDK5R1Q15078 307 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 GRK1Q15835 563 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 SPIN3Q5JUX0 258 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 DYRK2Q92630 601 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 ZNF747Q9BV97 191 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 HMG20AQ9NP66 347 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 CLEC2DQ9UHP7 191 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 GSTK1Q9Y2Q3 226 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 PCDHGB5Q9Y5G0 923 aa18.45■□□□□ 0.54
CCDC9-204ENST00000599398 GPR137BO60478 399 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 TMEM225BP0DP42 221 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 RAB3AP20336 220 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 COX7A1P24310 79 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 ZNF146Q15072 292 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 KISS1Q15726 138 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 ZNF782Q6ZMW2 699 aaPredicted RBP18.44■□□□□ 0.54
CCDC9-204ENST00000599398 C17orf107Q6ZR85 190 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 C11orf42Q8N5U0 333 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 GPR148Q8TDV2 347 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 RGP1Q92546 391 aaPredicted RBP18.44■□□□□ 0.54
CCDC9-204ENST00000599398 GGHQ92820 318 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 DCLRE1BQ9H816 532 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 SEBOXQ9HB31 216 aaPredicted RBP18.44■□□□□ 0.54
CCDC9-204ENST00000599398 EXOSC4Q9NPD3 245 aaKnown RBP18.44■□□□□ 0.54
CCDC9-204ENST00000599398 BABAM2Q9NXR7 383 aa18.44■□□□□ 0.54
CCDC9-204ENST00000599398 SIRPB1O00241 398 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 SH2D1BO14796 132 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 MAGEB3O15480 346 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 KDM4BO94953 1096 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 ALX3O95076 343 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 CD2P06729 351 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 ZNF728P0DKX0 622 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 RAG2P55895 527 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 MIDNQ504T8 468 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 SATL1Q86VE3 508 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 SAXO1Q8IYX7 474 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 TPRX1Q8N7U7 411 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 OR52N4Q8NGI2 321 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 OR4F5Q8NH21 305 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 PPP1R35Q8TAP8 253 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 C1RLQ9NZP8 487 aa18.43■□□□□ 0.54
CCDC9-204ENST00000599398 POM121CA8CG34 1229 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 PSPNO60542 156 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 SCN1BQ07699 218 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 ST3GAL4Q11206 333 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 TAF9Q16594 264 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 CRIP3Q6Q6R5 217 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 SHISA2Q6UWI4 295 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 OR4S1Q8NGB4 309 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 C17orf50Q8WW18 174 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 CPNE2Q96FN4 548 aaPredicted RBP18.42■□□□□ 0.54
CCDC9-204ENST00000599398 GPER1Q99527 375 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 BEX1Q9HBH7 125 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 TAS2R4Q9NYW5 299 aa18.42■□□□□ 0.54
CCDC9-204ENST00000599398 SIRT4Q9Y6E7 314 aaPredicted RBP18.42■□□□□ 0.54
CCDC9-204ENST00000599398 hADV38S2A0JD32 116 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms