RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 NEDD4LQ96PU5 975 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 OR2V2Q96R30 315 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 TMEM204Q9BSN7 226 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 DOPEY1Q5JWR5 2465 aa17.6■□□□□ 0.41
PNKP-203ENST00000593946 USP9XQ93008 2570 aaPredicted RBP17.59■□□□□ 0.41
PNKP-203ENST00000593946 A6NLC8 198 aa17.59■□□□□ 0.41
PNKP-203ENST00000593946 PDCD6O75340 191 aa17.59■□□□□ 0.41
PNKP-203ENST00000593946 OR7C1O76099 320 aaPredicted RBP17.59■□□□□ 0.41
PNKP-203ENST00000593946 IGHV1-46P01743 117 aa17.59■□□□□ 0.41
PNKP-203ENST00000593946 BTCP35070 178 aa17.59■□□□□ 0.41
PNKP-203ENST00000593946 IL13RA2Q14627 380 aa17.59■□□□□ 0.41
PNKP-203ENST00000593946 NKAPLQ5M9Q1 402 aa17.59■□□□□ 0.41
PNKP-203ENST00000593946 CCBE1Q6UXH8 406 aaPredicted RBP17.59■□□□□ 0.41
PNKP-203ENST00000593946 HES4Q9HCC6 221 aa17.59■□□□□ 0.41
PNKP-203ENST00000593946 UFSP2Q9NUQ7 469 aa17.59■□□□□ 0.41
PNKP-203ENST00000593946 ZNF107Q9UII5 783 aaPredicted RBP17.59■□□□□ 0.41
PNKP-203ENST00000593946 CENPXA8MT69 81 aa17.58■□□□□ 0.41
PNKP-203ENST00000593946 ADH4P08319 380 aa17.58■□□□□ 0.41
PNKP-203ENST00000593946 FUT3P21217 361 aa17.58■□□□□ 0.41
PNKP-203ENST00000593946 KIR2DL3P43628 341 aa17.58■□□□□ 0.41
PNKP-203ENST00000593946 SNU13P55769 128 aaKnown RBP17.58■□□□□ 0.41
PNKP-203ENST00000593946 PDCD1Q15116 288 aa17.58■□□□□ 0.41
PNKP-203ENST00000593946 LILRB1Q8NHL6 650 aaPredicted RBP17.58■□□□□ 0.41
PNKP-203ENST00000593946 PIK3IP1Q96FE7 263 aa17.58■□□□□ 0.41
PNKP-203ENST00000593946 HRASLSQ9HDD0 168 aa17.58■□□□□ 0.41
PNKP-203ENST00000593946 HRNRQ86YZ3 2850 aaPredicted RBP17.58■□□□□ 0.41
PNKP-203ENST00000593946 C3orf80F5H4A9 247 aa17.58■□□□□ 0.4
PNKP-203ENST00000593946 SLC6A1P30531 599 aa17.58■□□□□ 0.4
PNKP-203ENST00000593946 APOBEC3AP31941 199 aaPredicted RBP17.58■□□□□ 0.4
PNKP-203ENST00000593946 RCVRNP35243 200 aa17.58■□□□□ 0.4
PNKP-203ENST00000593946 GATA4P43694 442 aa17.58■□□□□ 0.4
PNKP-203ENST00000593946 ARFRP1Q13795 201 aa17.58■□□□□ 0.4
PNKP-203ENST00000593946 SPRNQ5BIV9 151 aa17.58■□□□□ 0.4
PNKP-203ENST00000593946 ENKURQ8TC29 256 aa17.58■□□□□ 0.4
PNKP-203ENST00000593946 SULT4A1Q9BR01 284 aa17.58■□□□□ 0.4
PNKP-203ENST00000593946 RCC2Q9P258 522 aaKnown RBP17.58■□□□□ 0.4
PNKP-203ENST00000593946 IL19Q9UHD0 177 aa17.58■□□□□ 0.4
PNKP-203ENST00000593946 ANAPC10Q9UM13 185 aa17.58■□□□□ 0.4
PNKP-203ENST00000593946 TPD52L2O43399 206 aaKnown RBP17.57■□□□□ 0.4
PNKP-203ENST00000593946 NXPH2O95156 264 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 MT-ND4P03905 459 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 IGFBP2P18065 325 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 CFHR2P36980 270 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 EFNB3Q15768 340 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 GVQW1Q8N7I0 195 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 TMEM229BQ8NBD8 167 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 DUSP18Q8NEJ0 188 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 ITLN1Q8WWA0 313 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 DIRC2Q96SL1 478 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 OCSTAMPQ9BR26 566 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 FAAP24Q9BTP7 215 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 IFT22Q9H7X7 185 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 DYSFO75923 2080 aa17.57■□□□□ 0.4
PNKP-203ENST00000593946 FAM240BA0A1B0GVZ2 78 aa17.56■□□□□ 0.4
PNKP-203ENST00000593946 M0R233 179 aa17.56■□□□□ 0.4
PNKP-203ENST00000593946 FCER2P06734 321 aa17.56■□□□□ 0.4
PNKP-203ENST00000593946 TNFSF4P23510 183 aa17.56■□□□□ 0.4
PNKP-203ENST00000593946 DUSP1P28562 367 aa17.56■□□□□ 0.4
PNKP-203ENST00000593946 PMELP40967 661 aa17.56■□□□□ 0.4
PNKP-203ENST00000593946 TNFAIP6P98066 277 aaPredicted RBP17.56■□□□□ 0.4
PNKP-203ENST00000593946 IKZF1Q13422 519 aa17.56■□□□□ 0.4
PNKP-203ENST00000593946 ZNF672Q499Z4 452 aaPredicted RBP17.56■□□□□ 0.4
PNKP-203ENST00000593946 IFT46Q9NQC8 304 aa17.56■□□□□ 0.4
PNKP-203ENST00000593946 C1orf123Q9NWV4 160 aa17.56■□□□□ 0.4
PNKP-203ENST00000593946 CISD1Q9NZ45 108 aaKnown RBP17.56■□□□□ 0.4
PNKP-203ENST00000593946 CHD6Q8TD26 2715 aa17.56■□□□□ 0.4
PNKP-203ENST00000593946 UBR5O95071 2799 aaPredicted RBP17.56■□□□□ 0.4
PNKP-203ENST00000593946 NAP1L6A6NFF2 107 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 C17orf100A8MU93 164 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 C19orf84I3L1E1 186 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 CBX5P45973 191 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 TAS2R19P59542 299 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 ZNF146Q15072 292 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 PLA1AQ53H76 456 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 ATAD3CQ5T2N8 411 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 OR10Z1Q8NGY1 313 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 FBXW5Q969U6 566 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 DHRS9Q9BPW9 319 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 FN3KRPQ9HA64 309 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 AK3Q9UIJ7 227 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 hCG_1807616A0A1W2PRN6 198 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 H3BUI4 141 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 CD3DP04234 171 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 CD55P08174 381 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 AKAIN1P0CW23 69 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 NAT1P18440 290 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 MST1LQ2TV78 715 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 SPIN3Q5JUX0 258 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 STEAP1BQ6NZ63 245 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 BRICD5Q6PL45 260 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 OR4C16Q8NGL9 310 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 WDR13Q9H1Z4 485 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 SPACA1Q9HBV2 294 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 NLKQ9UBE8 527 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 FAM208BQ5VWN6 2430 aa17.55■□□□□ 0.4
PNKP-203ENST00000593946 B9A039 149 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 WNT9BO14905 357 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 CD74P04233 296 aa17.54■□□□□ 0.4
PNKP-203ENST00000593946 FAUP35544 74 aaKnown RBP17.54■□□□□ 0.4
PNKP-203ENST00000593946 GMFBP60983 142 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms