RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 FAM89BQ8N5H3 189 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 TMEM229BQ8NBD8 167 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 POC1AQ8NBT0 407 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 BEST4Q8NFU0 473 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 OR10Z1Q8NGY1 313 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 GPX8Q8TED1 209 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 CCDC107Q8WV48 283 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 TMEM171Q8WVE6 324 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 NUDCD2Q8WVJ2 157 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 GCDHQ92947 438 aaPredicted RBP5.27□□□□□ -1.57
LIG3-206ENST00000586058 FBXW5Q969U6 566 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 CREB3L1Q96BA8 519 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 ARHGAP5-AS1Q96IT6 56 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 C1orf147Q96MC9 270 aaPredicted RBP5.27□□□□□ -1.57
LIG3-206ENST00000586058 SCGB3A2Q96PL1 93 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 OR2V2Q96R30 315 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 MRPL37Q9BZE1 423 aaKnown RBP5.27□□□□□ -1.57
LIG3-206ENST00000586058 CHST6Q9GZX3 395 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 C11orf54Q9H0W9 315 aaPredicted RBP5.27□□□□□ -1.57
LIG3-206ENST00000586058 OR51I2Q9H344 312 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 RIMS4Q9H426 269 aaPredicted RBP5.27□□□□□ -1.57
LIG3-206ENST00000586058 ZMAT3Q9HA38 289 aaKnown RBP5.27□□□□□ -1.57
LIG3-206ENST00000586058 SAP30LQ9HAJ7 183 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 GPN1Q9HCN4 374 aaPredicted RBP5.27□□□□□ -1.57
LIG3-206ENST00000586058 RAB9BQ9NP90 201 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 UFSP2Q9NUQ7 469 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 C1orf123Q9NWV4 160 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 RASL12Q9NYN1 266 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 NLKQ9UBE8 527 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 KLK11Q9UBX7 282 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 OR14J1Q9UGF5 321 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 IL19Q9UHD0 177 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 TBC1D24Q9ULP9 559 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 NPTNQ9Y639 398 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 CACNA1AO00555 2505 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 PIEZO1Q92508 2521 aa5.27□□□□□ -1.57
LIG3-206ENST00000586058 UBE2QL1A1L167 161 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 MEIOCA2RUB1 952 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 FUOMA2VDF0 154 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 DPRXA6NFQ7 191 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 C17orf100A8MU93 164 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 GEMIN2O14893 280 aaKnown RBP5.26□□□□□ -1.57
LIG3-206ENST00000586058 DEGS1O15121 323 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 SYNGR1O43759 233 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 PRAF2O60831 178 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 LILRA1O75019 489 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 GLAP06280 429 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 THBDP07204 575 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 SFTPBP07988 381 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 MELTFP08582 738 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 DTYMKP23919 212 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 GIFP27352 417 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 CHATP28329 748 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 SERPINF1P36955 418 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 PMELP40967 661 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 KCNJ3P48549 501 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 GMFBP60983 142 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 IFITM3Q01628 133 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 PLA2G7Q13093 441 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 KLF9Q13886 244 aaPredicted RBP5.26□□□□□ -1.57
LIG3-206ENST00000586058 KCNJ8Q15842 424 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 SCGB2B2Q4G0G5 96 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 PRAMEF6Q5VXH4 476 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 Q6ZNX1 250 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 C6orf201Q7Z4U5 140 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 C1QL2Q7Z5L3 287 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 FAM90A1Q86YD7 464 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 BATF2Q8N1L9 274 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 BPIFB2Q8N4F0 458 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 ARRDC1Q8N5I2 433 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 OR4K15Q8NH41 348 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 OR56B4Q8NH76 319 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 LINC01560Q8TB33 94 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 FAM222BQ8WU58 562 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 LRRC29Q8WV35 223 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 SNAPC3Q92966 411 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 SEH1LQ96EE3 360 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 MEGF10Q96KG7 1140 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 DHRS9Q9BPW9 319 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 GINS4Q9BRT9 223 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 CACNG6Q9BXT2 260 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 DNTTIP1Q9H147 329 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 C20orf85Q9H1P6 137 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 NUDT15Q9NV35 164 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 NECAP2Q9NVZ3 263 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 ETAA1Q9NY74 926 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 CISD1Q9NZ45 108 aaKnown RBP5.26□□□□□ -1.57
LIG3-206ENST00000586058 MTCH1Q9NZJ7 389 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 PPP1R3CQ9UQK1 317 aa5.26□□□□□ -1.57
LIG3-206ENST00000586058 RBMX2Q9Y388 322 aaKnown RBP5.26□□□□□ -1.57
LIG3-206ENST00000586058 DSCAML1Q8TD84 2053 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 LOC400499M0QZD8 3231 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 IGKV1-12A0A0C4DH73 117 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 ZSCAN5BA6NJL1 495 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 INMT-MINDY4F8WBC2 141 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 H0YL77 283 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 SIRPB1O00241 398 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 HSPB6O14558 160 aa5.25□□□□□ -1.57
LIG3-206ENST00000586058 NOS1APO75052 506 aaPredicted RBP5.25□□□□□ -1.57
LIG3-206ENST00000586058 RHBDL1O75783 438 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms