RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 NMNAT2Q9BZQ4 307 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 C1orf198Q9H425 327 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 OPN4Q9UHM6 478 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 NTNG1Q9Y2I2 539 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 MEMO1Q9Y316 297 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 PRELID3BQ9Y3B1 194 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF337Q9Y3M9 751 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF175Q9Y473 711 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 DMDP11532 3685 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 ABCA2Q9BZC7 2435 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 IGHV4-61A0A0C4DH41 118 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 IGKV1-8A0A0C4DH67 115 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 P2RX6O15547 441 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 CDC40O60508 579 aaKnown RBP eCLIP3.52□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF254O75437 659 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 TXNDC12O95881 172 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 CD8AP01732 235 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 IGHV4-59P01825 116 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 SELEP16581 610 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 HLA-GP17693 338 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 CXCL2P19875 107 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 VEGFCP49767 419 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 TAS2R20P59543 309 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 SKP1P63208 163 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 CTAG1AP78358 180 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 ZNHIT3Q15649 155 aaPredicted RBP3.52□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF141Q15928 474 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 MRPL2Q5T653 305 aaKnown RBP3.52□□□□□ -1.85
LINC00561-201ENST00000565815 SLC25A25Q6KCM7 469 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 FAHD2BQ6P2I3 314 aaPredicted RBP3.52□□□□□ -1.85
LINC00561-201ENST00000565815 APOOLQ6UXV4 268 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 SLC36A1Q7Z2H8 476 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 COX18Q8N8Q8 333 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 OR5J2Q8NH18 312 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 HPSE2Q8WWQ2 592 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 PTX4Q96A99 478 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 SLC25A38Q96DW6 304 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 TM4SF19Q96DZ7 209 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 FAHD2AQ96GK7 314 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 C4orf45Q96LM5 186 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF416Q9BWM5 594 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 AICDAQ9GZX7 198 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 COMMD4Q9H0A8 199 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 SLC26A1Q9H2B4 701 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 OR51V1Q9H2C8 321 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 IFT46Q9NQC8 304 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 MBD2Q9UBB5 411 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 SLC22A7Q9Y694 548 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 KCNE3Q9Y6H6 103 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 NBEAQ8NFP9 2946 aa3.52□□□□□ -1.85
LINC00561-201ENST00000565815 A0A087X002 238 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 FAM183AA6NL82 134 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 SMIM1B2RUZ4 78 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 BLOC1S5-TXNDC5H3BN57 136 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 SRPX2O60687 465 aaPredicted RBP3.51□□□□□ -1.85
LINC00561-201ENST00000565815 CFDP00746 253 aaPredicted RBP3.51□□□□□ -1.85
LINC00561-201ENST00000565815 GKN3PP0CG01 181 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 PNMTP11086 282 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 FOLR1P15328 257 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 GNB3P16520 340 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 HTR2AP28223 471 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 OTX2P32243 289 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 ACVR1BP36896 505 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 GFERP55789 205 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 TAS2R19P59542 299 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 SCRN3Q0VDG4 424 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 INSL4Q14641 139 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 MEF2DQ14814 521 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 DUSP5Q16690 384 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF684Q5T5D7 378 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 OR4A47Q6IF82 309 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 RHBDD2Q6NTF9 364 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 CHMP1BQ7LBR1 199 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF329Q86UD4 541 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 DND1Q8IYX4 353 aaKnown RBP3.51□□□□□ -1.85
LINC00561-201ENST00000565815 LRRC75A-AS1Q8N1F1 130 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 TMEM229BQ8NBD8 167 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 PXT1Q8NFP0 134 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 OR7G2Q8NG99 324 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 OR13C2Q8NGS9 318 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 SYNPRQ8TBG9 265 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 PATE1Q8WXA2 126 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 ASB17Q8WXJ9 295 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 TMEM158Q8WZ71 300 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 SEC22CQ9BRL7 303 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 FKRPQ9H9S5 495 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 RASL12Q9NYN1 266 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 MRPS7Q9Y2R9 242 aaKnown RBP3.51□□□□□ -1.85
LINC00561-201ENST00000565815 SPTBN1Q01082 2364 aaKnown RBP3.51□□□□□ -1.85
LINC00561-201ENST00000565815 NUP210LQ5VU65 1888 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 A0A1B0GWA3 101 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 KANTRA0A1W2PQU2 76 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 CIB4A0PJX0 185 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 C5orf51A6NDU8 294 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 ATP6V1G2-DDX39BF2Z307 99 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 GMDSO60547 372 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 FCMRO60667 390 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 GPR75O95800 540 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 CD37P11049 281 aa3.51□□□□□ -1.85
LINC00561-201ENST00000565815 TBPP20226 339 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms