RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 TMEM106AQ96A25 262 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 DMRTB1Q96MA1 342 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 DUX5Q96PT3 197 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 JMJD8Q96S16 334 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 ANKRD60Q9BZ19 345 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 VCX3BQ9H321 246 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 NEK6Q9HC98 313 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 IGHV1-69DA0A0B4J2H0 117 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 TMEM82A0PJX8 343 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 DNAJC9-AS1A6NH13 148 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 K7N7A8 449 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 KDM4BO94953 1096 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 HAND1O96004 215 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 IGHV1-69P01742 117 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 CD2P06729 351 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 CHRM2P08172 466 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 RAB3AP20336 220 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 UBA52P62987 128 aaKnown RBP12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 RIPK1Q13546 671 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 CMTM4Q8IZR5 234 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 OR52N4Q8NGI2 321 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 HMG20AQ9NP66 347 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 PCDHGB5Q9Y5G0 923 aa12.62□□□□□ -0.39
CCNDBP1-203ENST00000562553 RNASEK-C17orf49H0YIS7 233 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 TRIM77I1YAP6 450 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 M0R1W7 72 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 GABRPO00591 440 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 TAS2R43P59537 309 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 RPL31P62899 125 aaKnown RBP12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 SLC35A2P78381 396 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 BAMBIQ13145 260 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 ZNF273Q14593 569 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 ZNF146Q15072 292 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 TMEM200BQ69YZ2 307 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 RBMS3Q6XE24 437 aaKnown RBP12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 C17orf107Q6ZR85 190 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 SAXO1Q8IYX7 474 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 ZFAND2BQ8WV99 257 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 TNFRSF14Q92956 283 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 FAM234AQ9H0X4 552 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 SCN3BQ9NY72 215 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 ERGIC3Q9Y282 383 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 GSTK1Q9Y2Q3 226 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 KIAA2026Q5HYC2 2103 aa12.61□□□□□ -0.39
CCNDBP1-203ENST00000562553 A0A1W2PRD5 423 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 A0A1W2PRF3 423 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 A0A1W2PRM7 423 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 MEX3AA1L020 520 aaKnown RBP12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 MAGEA13PA6NCF6 341 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 PSPNO60542 156 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 TMEM225BP0DP42 221 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 CCL3L1P16619 93 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 CELP19835 753 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 BPIFB3P59826 476 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 IRF3Q14653 427 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 Q499Y3 187 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 YIF1BQ5BJH7 314 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 RNLSQ5VYX0 342 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 METAP1DQ6UB28 335 aaPredicted RBP12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 FIP1L1Q6UN15 594 aaKnown RBP12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 SATL1Q86VE3 508 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 OR8H2Q8N162 312 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 PNKDQ8N490 385 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 ZSCAN4Q8NAM6 433 aaPredicted RBP12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 MYDGFQ969H8 173 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 SNX22Q96L94 193 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 OR14A2Q96R54 314 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 OR5M11Q96RB7 305 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 CDCA4Q9BXL8 241 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 CHST6Q9GZX3 395 aa12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 SEBOXQ9HB31 216 aaPredicted RBP12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 LSM2Q9Y333 95 aaKnown RBP12.6□□□□□ -0.39
CCNDBP1-203ENST00000562553 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 TRBV5-7A0A0A0MS05 114 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 A0A0U1RQK1 487 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 A0A1W2PPK0 400 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 SIRPB1O00241 398 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 IGFBP3P17936 291 aaPredicted RBP12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 GABRR1P24046 479 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 PRTN3P24158 256 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 OR3A4PP47883 348 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 HSPA13P48723 471 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 EDDM3BP56851 147 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 ERVFRD-1P60508 538 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 PPP3R1P63098 170 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 EDDM3AQ14507 147 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 SLC9A3R2Q15599 337 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 SPIN3Q5JUX0 258 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 DDI2Q5TDH0 399 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 HCP5Q6MZN7 132 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 C1orf122Q6ZSJ8 110 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 TCF23Q7RTU1 214 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 C11orf42Q8N5U0 333 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 TPRX1Q8N7U7 411 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 OR4S1Q8NGB4 309 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 FAM216AQ8WUB2 273 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 TNFAIP8L1Q8WVP5 186 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 CNBD2Q96M20 576 aa12.59□□□□□ -0.39
CCNDBP1-203ENST00000562553 GPER1Q99527 375 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms