RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 NPIPA2E9PIF3 369 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 NPIPA3F8WFD2 350 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 GPR37O15354 613 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 RPS10P46783 165 aaKnown RBP15.24■□□□□ 0.03
SYNE3-202ENST00000553340 ASCL1P50553 236 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 OR2C3Q8N628 320 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 SLC35G3Q8N808 338 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 OR2G3Q8NGZ4 309 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 ZNF385AQ96PM9 386 aaKnown RBP15.24■□□□□ 0.03
SYNE3-202ENST00000553340 RASL10BQ96S79 203 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 TOLLIPQ9H0E2 274 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 FAM221AA4D161 298 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 RBFOX3A6NFN3 312 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 ITGA3P26006 1051 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 RBP2P50120 134 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 KIAA0141Q14154 515 aaPredicted RBP15.24■□□□□ 0.03
SYNE3-202ENST00000553340 PRAMEF20Q5VT98 475 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 BRICD5Q6PL45 260 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 OR10AD1Q8NGE0 317 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 OR2AE1Q8NHA4 323 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 AKR7LQ8NHP1 331 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 BORCS8Q96FH0 119 aa15.24■□□□□ 0.03
SYNE3-202ENST00000553340 IGKV1-27A0A075B6S5 117 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 GEMIN2O14893 280 aaKnown RBP15.23■□□□□ 0.03
SYNE3-202ENST00000553340 FBP1P09467 338 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 PNLIPP16233 465 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 HERV-K104P61576 105 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 HIKESHIQ53FT3 197 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 MEX3BQ6ZN04 569 aaKnown RBP15.23■□□□□ 0.03
SYNE3-202ENST00000553340 CADM4Q8NFZ8 388 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 OR14L1PQ8NHC6 308 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 DEFB126Q9BYW3 111 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 BCO1Q9HAY6 547 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 TIAF1O95411 115 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 FBXL14Q8N1E6 418 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 SMRP1Q8NCR6 262 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 OR8G5Q8NG78 346 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 MUCL1Q96DR8 90 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 GGACTQ9BVM4 153 aa15.23■□□□□ 0.03
SYNE3-202ENST00000553340 ADAMTS20P59510 1910 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 BTBD17A6NE02 478 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 FAM24AA6NFZ4 105 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 VAMP5O95183 116 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 CDS2O95674 445 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 CD63P08962 238 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 HOXA5P20719 270 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 ATP6V0CP27449 155 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 HTR5AP47898 357 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 PIGYQ3MUY2 71 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 ASCL4Q6XD76 172 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 LHFPL2Q6ZUX7 228 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 TMEM123Q8N131 208 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 OSR2Q8N2R0 312 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 MR1Q95460 341 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 SLAMF9Q96A28 289 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 ULBP2Q9BZM5 246 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 IGHV3-15A0A0B4J1V0 119 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 WRBO00258 174 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 TP53I11O14683 189 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 SRPXP78539 464 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 OR6C1Q96RD1 312 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 TP53RKQ96S44 253 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 BCL2L14Q9BZR8 327 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 CHRDQ9H2X0 955 aa15.22■□□□□ 0.03
SYNE3-202ENST00000553340 H3BQ15 152 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 TERTO14746 1132 aaKnown RBP15.21■□□□□ 0.03
SYNE3-202ENST00000553340 SCRG1O75711 98 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 CCL20P78556 96 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 FAM27BQ5VT28 67 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 MAML2Q8IZL2 1156 aaPredicted RBP15.21■□□□□ 0.03
SYNE3-202ENST00000553340 SLC25A45Q8N413 288 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 ZFP62Q8NB50 900 aaPredicted RBP15.21■□□□□ 0.03
SYNE3-202ENST00000553340 DMRT1Q9Y5R6 373 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 BRWD1Q9NSI6 2320 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 C3orf85A0A1B0GTC6 90 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 HSPA12AO43301 675 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 GATCO43716 136 aaKnown RBP15.21■□□□□ 0.03
SYNE3-202ENST00000553340 PITX3O75364 302 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 DKK1O94907 266 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 AADACP22760 399 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 NKX2-1P43699 371 aaPredicted RBP15.21■□□□□ 0.03
SYNE3-202ENST00000553340 KIAA1456Q9P272 454 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 ST3GAL6Q9Y274 331 aa15.21■□□□□ 0.03
SYNE3-202ENST00000553340 CHCHD2Q9Y6H1 151 aaPredicted RBP15.21■□□□□ 0.03
SYNE3-202ENST00000553340 A0A087WZY1 265 aa15.2■□□□□ 0.02
SYNE3-202ENST00000553340 TRBV23-1A0A0A0MS06 115 aa15.2■□□□□ 0.02
SYNE3-202ENST00000553340 NKX2-6A6NCS4 301 aa15.2■□□□□ 0.02
SYNE3-202ENST00000553340 YIF1AO95070 293 aa15.2■□□□□ 0.02
SYNE3-202ENST00000553340 CRYGSP22914 178 aa15.2■□□□□ 0.02
SYNE3-202ENST00000553340 TAGLN2P37802 199 aaKnown RBP15.2■□□□□ 0.02
SYNE3-202ENST00000553340 CDX1P47902 265 aaPredicted RBP15.2■□□□□ 0.02
SYNE3-202ENST00000553340 RAB35Q15286 201 aa15.2■□□□□ 0.02
SYNE3-202ENST00000553340 SPSB3Q6PJ21 355 aa15.2■□□□□ 0.02
SYNE3-202ENST00000553340 NAXEQ8NCW5 288 aa15.2■□□□□ 0.02
SYNE3-202ENST00000553340 INTS12Q96CB8 462 aaKnown RBP15.2■□□□□ 0.02
SYNE3-202ENST00000553340 RAB39BQ96DA2 213 aa15.2■□□□□ 0.02
SYNE3-202ENST00000553340 UCN2Q96RP3 112 aa15.2■□□□□ 0.02
SYNE3-202ENST00000553340 PAPOLGQ9BWT3 736 aaKnown RBP15.2■□□□□ 0.02
SYNE3-202ENST00000553340 SLC25A31Q9H0C2 315 aa15.2■□□□□ 0.02
SYNE3-202ENST00000553340 ZNF700Q9H0M5 742 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms